Nematostella vectensis (starlet sea anemone): 5517271
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Entry
5517271 CDS
T01037
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
5517271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5517271
03036 Chromosome and associated proteins [BR:
nve03036
]
5517271
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
5517271
Coactivators
SAGA/TFTC/STAGA complex
5517271
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
5517271
STAGA complex
5517271
TFTC complex
5517271
SAGA complex
5517271
SLIK complex
5517271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
DUF2848
Bromo_TP
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
5517271
NCBI-ProteinID:
XP_001637338
UniProt:
A7RTJ4
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAEASEDEVESVDSQLIAESIKVIAESIGVRNLNHEAIGTLMEEGTYRLKQLTQESSKFM
QKSKRKKLMTKDIDNALRLQNVEPLYGFVAQDFIPFRFASGGGREVFFYDDPEIDLNDVI
NTQLPRIPVDVSLKAHWLSIEGLQPAIPENPPPALADQLKREEQKPVFTTKAAPDKTKPG
QKRPKAEVDSKSNKKPAITKHTISSIPSNKADKTKGLVTHELSVEQQLYYKEITEACVGS
CESRRTEALQSLATDPGLYQMLPRFCTFISEGVRVNVAQNNLVLLIYLMRMVKALLDNST
LFLEKYLHEMIPAVVTCVVSKQLCPKPEVDNHWALRDFGARLVAQICRSFNSTTNSVQTR
VTKTYCKALHQEKAPLATHYGAITGLAELGQEVIKVLVLPRLKIESALISRALQGTDVVE
KNAAENLQNLLLKHCPGVIIRIRHAPDAQDKYEAEYGSLGRLLCTKVLQLRQGVNKPNVL
TIKASSVSTPTTPTTPGTLKATPVLIVTKPMTPTTTPTRPVTLTGSTTPTGNRLITLSGV
TPGIPTGTLPVTLSGTMTPGTTTNRTVPLSGSLTPGTPTGSRPVTLSGTVTAGTSSTSRS
VTLSSVGTPGTPLHSLVITSVGGTPTSVPVTPTGVTKSGVTQFVMHGNLQSPTINQPQQK
PQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcaagcgaagacgaggtggaaagcgtagatagtcagctaatcgctgagagt
attaaagttatcgctgaatcgatcggagtgaggaatttgaaccatgaagctattgggact
ttgatggaagaagggacgtacagactaaaacaactcactcaggaatcgtcaaagttcatg
cagaaatccaaaaggaaaaagttaatgactaaagatatcgataacgccttgagactccag
aatgtcgagcctctgtatgggttcgttgcacaggatttcatacccttcagatttgctagc
ggaggtggtagagaagtatttttctatgatgatccagagatagacctgaatgacgtcatt
aacactcagttgccacggataccagtagacgtatcactgaaagctcattggctgagcatc
gaaggtcttcaacctgctatccctgaaaatcctccccctgctttagcagaccaactgaaa
agagaagagcagaaacctgtatttaccacaaaggcagcccctgataaaaccaaacctggg
cagaaaagacccaaggcagaggtggactcaaagtcaaacaagaaaccagctataacaaaa
cataccataagctccatcccaagtaacaaggctgacaagactaagggacttgtcacacat
gagctgtctgtggagcagcaactttactacaaagaaatcactgaggcctgtgttggctca
tgcgagtctaggagaactgaagcacttcaaagtcttgcgactgatccaggactttaccaa
atgctgccaagattttgtacttttatatctgaaggggtccgtgtgaatgtggctcagaac
aacttggtacttctgatctaccttatgagaatggtgaaagctctgctggacaactctacc
cttttcctggaaaaatacctccatgaaatgatccctgctgttgtcacatgtgtggttagc
aagcagctttgtcccaagccagaggttgacaaccactgggctctcagagactttggagct
cgattggttgcccaaatatgcagatcatttaattcgactaccaacagcgttcaaaccaga
gtgacaaaaacttactgcaaggcgctacaccaagagaaagccccgctagccacacactat
ggcgccatcactggactcgctgagctcggacaagaggttataaaagtgcttgttcttcct
cgactcaagatcgaaagtgcgctcatctcgcgcgctttgcagggcacggatgtcgtagag
aaaaacgccgcggagaacttgcagaatctgttattgaaacattgccccggtgtaatcatt
cgcatccgacatgcaccagatgcacaagacaaatacgaagcagaatacggctcccttggc
cgactcttatgcaccaaggtgttacaactacgacaaggcgtcaataaaccgaacgtgttg
accatcaaggcaagtagtgtctcaacacctaccacacccactacacccggaacactcaaa
gcaacacccgtactgatagtgaccaagccgatgacacctacaacaactcctacgcgtcct
gtcaccctgactggttccaccacgcccactggtaaccgactcatcactctgtcgggcgtg
acacctggaatacctactggtactctgcctgttactctgtccgggaccatgacacccggg
acaactactaaccggacagtccccctgtcgggatccttgacacctggaacacctactgga
agtcgccctgtcactctttcgggtaccgtgacagctggaacaagttctactagccggtct
gtgacgctgtctagcgtgggcacgccaggtactcctttgcattcccttgtaataacaagc
gttggaggtacgcccactagcgtccctgtgacacctactggcgtgacaaagagcggtgtc
acgcaattcgtcatgcatggcaatctgcagtcgccaacaataaaccagcctcaacagaag
ccacagtag
DBGET
integrated database retrieval system
