Nematostella vectensis (starlet sea anemone): 5517568
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Entry
5517568 CDS
T01037
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nve03009
]
5517568
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
5517568
Ribosome biogenesis [BR:
nve03009
]
Eukaryotic type
Pre-60S particles
Helicases
5517568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
5517568
NCBI-ProteinID:
XP_032217927
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MKPKSSKFSGKKQTKKTNSKPAKFKHRKERRSAKRKASKEDEEALEFLEVGNEVKDVVES
DNEEEINELDTRKLVSQQNKKKKKSGGFQSLGLSFPVFKGVMKKGYKVPTPIQRKTLPLV
MDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELG
RFTGLKSSVILGGDSLEGQFAAIHTNPDIVVATPGRFLHVVMEMELKLSSVEYVVFDEAD
RLFEMGFAEQLHEIIHRLPESRQTLLFSATLPRLLVDFAKAGLCDPALVRLDVDTKLSEQ
LKLAFFHVRSDDKQAALMHLLQNVIKPTEQTLIFAATKHHVEYLKEMLLSGGIDCSYVYS
SLDQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKLFVHRVGRVA
RAGRSGTAYSLVANDEVAHLLDLHLFLGRPLRLSATGSQEEDGVFGGMPQQVLDEEDATL
RTIHDNSHDLMTLQGVCANAYKQYIRSRPQASSESVKRSKELMATPLAVHPLLGDPSEVT
DVPLSQLIDSVRNFKPRQTIFEVNPTSKTSARDVMKSKRAQHGNTIEKVHSLKQQQQPYI
EKTHTSPEGENVDMDDADVKGLFATIIDPSENKKRKPKRNGSSHNFRDENYISHTSSDHY
AERGLGLGLNSFEKEATGAVIDIVGDDDETLRKKKGLKKWDRKRKRFVGEEGNKKKIRTE
SGARIPASYKRNIYKDWVKRNKLDTPGADLDEGGGKRGKKGKFKKGSRSRSGPRPQRNEI
KSKEQILKARKTKERLMNRQKTGKDRNKKRKMIRGK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaaatcgagcaagttttctggcaagaagcagacgaagaaaacaaacagcaaa
ccggcaaaattcaagcatcgaaaggaaagacgatctgccaaacgcaaggcttccaaagaa
gatgaagaggcgctagagttcttggaggttggaaatgaagtcaaggacgttgtagagtct
gacaatgaggaggaaatcaatgaacttgatacaagaaaacttgtctcccagcaaaacaaa
aaaaagaagaagtctggaggttttcaatctctggggctgagcttccctgtgtttaaagga
gtaatgaagaaaggctacaaagtccctactcctatacaaagaaagacactaccccttgtc
atggatggcaaagatgtggttgccatggcaagaacaggttctggaaaaactgcagctttc
ctgatcccaatgtttgagaaactgcagactcatacagccaaggttggaataagggctctt
atcctctcccctactcgtgaattagccttgcaaacacagaaattcataaaagagcttggt
cgctttactggattaaaatcatctgtgattcttggaggagacagcttagagggacaattt
gctgccatccacaccaaccccgatattgtcgtcgctacaccaggtcgctttctgcatgtt
gtcatggagatggaattaaagctgtcatctgtggagtatgtggtgtttgacgaggctgac
aggttgtttgagatgggttttgcagaacagctgcatgagattatccacaggcttcctgag
tcaagacagacactgctgttttctgccaccctgccaagactccttgtagactttgcaaaa
gctgggctatgtgacccagcgcttgtcagacttgatgtagataccaaattaagtgagcag
ttaaagcttgcatttttccatgtacgctctgatgacaaacaagctgccctgatgcatctg
ctacaaaacgtcatcaagccaacggaacagacacttatttttgcagcaacaaaacatcat
gtggaatacttaaaagagatgttgctgagtggaggaattgattgttcgtatgtgtacagt
tcactggaccagacagcacgtaccatcaacgttggcaaattccagcataagaaaacgatg
gtgatggttgtgacagatgttgcggcacgaggtatagacatccccatgttggataatgtg
atcaactttcacttcccgccaaaggcaaaacttttcgtccaccgagtcggtcgtgttgcc
cgtgctggaagatcagggacagcttattcactcgttgcgaacgatgaggtggcacacttg
ctagacctccacttgttccttggtagacccctaaggctaagtgccacagggtcacaggaa
gaggacggggtgtttggtggaatgccacagcaagttctggatgaggaagatgccaccctg
cgcaccattcacgacaactcccacgacttgatgacactacaaggggtgtgcgccaacgcc
tacaaacagtacataaggtctcgtcctcaggcctcctcggaatccgtcaagaggtcgaag
gaactaatggcaactccactggcagttcatcctctgttaggagatcctagtgaggtaacg
gatgtccccctttctcagctcatagacagcgtgagaaactttaaaccccgccagaccatt
tttgaagtgaacccgacatccaagacatccgccagagacgtcatgaaatccaaacgggca
caacatggtaacaccatcgagaaagtgcacagtctgaagcaacaacaacagccatacatc
gagaagacccacacctcccctgagggggagaatgtcgacatggacgatgcggatgttaag
ggtcttttcgctacaataattgaccccagcgagaacaagaagcgaaaaccaaaaagaaat
gggtcatcacataactttagagacgaaaactacatctcacacacgtcatctgatcactat
gccgagagaggcctggggttagggctgaactcttttgagaaggaggccactggagccgtg
attgatatcgtaggagatgatgacgaaacgctgaggaaaaagaaagggttgaagaaatgg
gatcgtaagaggaaacggttcgtcggcgaggaaggcaacaagaagaaaatccggacggaa
agtggtgcgcggattcccgcctcgtacaagaggaacatctacaaggactgggtcaagaga
aacaagctggacacacccggggcggacctggacgagggcgggggcaagcgcggcaaaaaa
gggaaattcaagaaaggttctcgctctagaagtggaccacgtccacaaagaaacgaaatt
aaatccaaggaacagatactgaaagcgcgaaagacaaaggagagattaatgaaccggcag
aaaacggggaaagacagaaataagaaacggaaaatgatcagagggaaatag
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