Nematostella vectensis (starlet sea anemone): 5518402
Help
Entry
5518402 CDS
T01037
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
5518402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nve03400
]
5518402
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
5518402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
T3SS_needle_reg
Motif
Other DBs
NCBI-GeneID:
5518402
NCBI-ProteinID:
XP_032219041
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MATLFSYFTKVPANKSPNAGDRPETNGKTSPKGKAKTPETKKEVKTSTKANDSHVFVQKI
CDVVWAKMEGHPIWPAIVCNHPRLNIHARSNEYHVQFFGEPPSRGWVKKTLIQPFVKGEN
KGGHSLAIRAAVEQAEKALALSSTEREGLICCIPSDEESEAEMERNASQENDSGDGSTDD
EVNTAMQKNKRPRRKAAVGGMKKRKRVMIESDSDGSDDFKPESEESDDSVSSGAEEEEPS
SDNNSEDEEEEETKNTKKRKRGSTSTPSSKKGKLAPNMTSNPTSNTPKPAKLSSSLATKI
TNSASKAATSLARFQMTSSPAPVTEPDENGNTGVYLHEKLDWLKEGKRKDKHGRPMLHPD
YDPKTLLVPQSYLTSKDVTPAMRQWWQLKSEHFDTVLFFKVGKFYELYHMDATTGVKELN
LIYMKGNFAHAGFPEIAFGRYSDTLIQKGYKIARVEQTETPEMMKERCKKNRTNSKFDQV
VKREICAVTTKGTKMYSFRDGDCTESEAAYLLAVAEKELSDCGGESMYGVCFLDTSIGKF
HIGQFKDDRQASRLRTLIAHHPPVQVLTCRGSYTSKTQHILSHELMSSLTEHLAPGSEFW
DASKTLKFLAEGNYFKNDKDGADESVNWPAMLKMMTDGDPLGLTPTDGHELALSALGAVT
WYLKKCLIEEELLSMGKFEEYKPLDCLDAPRSSTLSFTQGRQHLILDDVTLTNLDVVPCG
PDGSLQGTLLEQLDHCSTPFGKRLFKQWLCAPLCNPMAINDRLDAIEDLMAVPAVVCDVK
EILKTLPDLERLLRKIHSLGSVRRATDHPDGRAILYNEETYSKRKIADFLSVLEGLKSTV
RIVKLFKDHVSEFKSKLLKQIITQDAQGDKSSNGRFPHMESELKAFQGAFDHEKAKKDGI
ILPKPGVQPDYDQALEDITSCKEWFMKFLDKQRNRLGCKTMCYWGSAKNRYQLEIPESAL
GRNTPDEYTLQSQKKGFRRFWTTEIEEKLAELTEAEERRDAALKDTMRNLFHRFDEHYDM
WDQAVQCLSVLDALLSLMTYSSHGDGTMCRPDVILPDMTPEGNHTPFIEIRDGRHPCIAR
TFTGDDFIPNDTVIGIGNKADESESAANAHSTCVLVTGPNMGGKSTLMRQVGLITIMAQL
GCYVPAELCRLTPVDRVFTRLGAHDRILAGESTFFVELSETATILRHSTRDSLVLLDELG
RGTATYDGTAIACAVVRELSANVRCRTLFSTHYHSLVEEFATDPNVRLGHMACMVENEDE
EGDPSKETITFLYKFVRGDCPKSYGFNAARLAGIPGQIITVAVQKSRKFEETMDQVKMFR
EILTHTQPVTIKKRLLSLKEKKSSFD
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttttctcttatttcacgaaagttcccgcaaacaagtctccaaatgctggg
gatcgccccgaaacaaacggcaaaacatcgccaaaggggaaagcaaagacgccggagaca
aagaaagaggttaaaacctcaaccaaggcaaacgacagccatgtatttgtacaaaagata
tgtgatgttgtttgggctaagatggaaggacatccaatatggcctgcgattgtttgcaat
catcctaggctgaatattcacgccaggagtaatgagtaccatgtgcagttctttggggag
cctccgagtagaggatgggttaaaaagactcttatacaaccctttgtcaagggggagaat
aaggggggtcacagcctggctatcagggcagctgtggagcaagctgagaaggcgttagct
ctgtcgtcaacagagagggaggggcttatatgctgcataccatcagatgaggagagtgag
gctgagatggaaaggaatgcttctcaagagaacgactctggtgatggcagtactgatgat
gaagttaatactgccatgcaaaaaaacaagaggcccagacgtaaagcagctgttggagga
atgaagaagagaaaaagagtgatgattgagtcagactctgatggatcagacgactttaag
cctgagagtgaagagtctgatgacagtgttagcagtggtgcggaggaggaagagccctct
tctgataataacagtgaagacgaagaagaagaggagactaaaaacaccaagaagagaaag
cgtggctcaacctcaacgccaagttcaaagaagggcaagctagcaccaaacatgacctca
aaccctacaagcaacacaccaaagcctgccaaactatcatcctcacttgctaccaagatc
accaactctgcaagcaaagccgcaacctcattggctcgctttcagatgacatcatctcct
gctccggtgactgaacctgatgagaatggaaacactggggtctacctccatgagaaattg
gattggctcaaggaagggaaacggaaagacaaacatggaaggccaatgttacacccagac
tatgatcccaaaacacttttggtacctcaatcctatcttacctcaaaagacgtcactcca
gcaatgagacagtggtggcaactaaaaagtgaacacttcgacactgtcttgttctttaag
gttggcaagttctacgagttataccatatggatgccacaacaggggtgaaggagctcaac
ttgatctacatgaagggtaactttgcacatgctggttttccagaaattgcatttggacgc
tactcagacactcttatccagaaaggatataagattgccagagtagagcagactgagaca
cctgaaatgatgaaagagcgatgcaaaaagaatagaacaaactctaagtttgaccaagtg
gtgaaaagagagatctgcgcagttacaacaaaaggaactaaaatgtatagctttcgtgat
ggtgactgtacagagtcagaggctgcctatttactggctgttgcagagaaggaactgagt
gattgcggcggtgaaagcatgtatggtgtgtgctttctggatacttctattggcaagttt
catattggtcaattcaaggatgacagacaggcatcacgtcttcgcactctcattgctcac
cacccccctgtgcaggttttaacatgccgcggtagttacacttccaagacccagcacatt
ttaagtcatgagttgatgtcgtcccttacagagcatcttgcaccaggtagcgaattttgg
gatgcgagcaagactttgaaattccttgctgaaggaaactatttcaagaatgataaggat
ggcgccgatgaatccgttaactggccagcgatgctaaaaatgatgacagatggagaccct
cttggactcaccccaacagatggacatgagcttgctctgagtgcattaggagctgtcaca
tggtatcttaagaaatgcctcatagaagaagagttgctttcaatgggtaaattcgaggaa
tacaagccacttgactgtctagatgcacctcggagcagcactttgtcattcacacagggg
cgccagcacttgatccttgatgacgtcactttgacaaatctggacgtagtgccatgtggt
cctgatggttctcttcaaggaactcttttagagcaactggaccactgcagtacacctttt
ggaaaacggctcttcaaacagtggttatgtgctcctttgtgtaatccaatggccattaac
gatagactagatgcaatcgaggacttgatggcagtgcctgctgttgtttgtgatgtcaag
gaaattctgaaaactcttccagacttggaaagattgctaagaaagatacatagccttgga
tctgtgagaagagcgacagaccatcctgatggaagagccattctttacaacgaggagact
tacagtaagcgcaagatcgctgacttcctttctgtacttgaggggttgaagagtaccgtg
cgcattgtcaagctgttcaaggaccatgtgtctgagttcaagtcgaagctgttaaaacag
atcattacccaagatgcacaaggcgacaagtcgtcaaacggtcgctttccacacatggaa
agtgaacttaaagcttttcagggtgcatttgatcacgaaaaagcaaagaaagatggcatc
atcctcccgaaacctggtgtccagccagattacgaccaagcgctagaggacatcacctcc
tgcaaggaatggttcatgaaatttctagacaaacagcgcaatcgacttgggtgcaaaaca
atgtgttactggggctcggctaagaatcgctaccagctcgaaattcctgaatccgctctt
ggccgcaacactcctgacgagtatactctgcagtcgcagaagaaaggttttcggcgcttt
tggacgacagaaattgaagaaaaactcgccgagttgacagaagcagaggagcgtcgcgat
gcagcactcaaagacaccatgagaaacctctttcacagattcgacgaacactatgacatg
tgggatcaagcagttcagtgtctttctgtcctcgatgcgttacttagcctaatgacatac
agttcccatggtgacggcacaatgtgtagacctgacgtcattttgcctgacatgacaccg
gagggaaatcacacgcctttcatagagatccgagatggtcgccatccctgcatcgctcgt
acatttaccggagatgacttcatccctaatgacacagtcatcggcattggcaacaaggca
gacgagtccgagtcagcggcgaatgctcacagcacatgcgtactggtaacaggccccaat
atgggtggcaagtctaccctgatgaggcaggttggactcatcactataatggcgcaactg
ggatgctatgtgccagccgagttgtgccgtctgacgcctgtagaccgagtttttaccaga
cttggagctcatgacaggatactggcaggcgagagtaccttctttgtcgagctaagcgag
acagcaaccattctacgtcactcgacacgtgactcccttgtgttgcttgatgagcttggt
cgcggcaccgccacctatgatggtactgccattgcttgtgctgtggtgagggaactctcc
gctaacgtacggtgcaggacactattctccacccactaccactccctggtggaggaattt
gctactgaccctaatgtgcggctaggtcatatggcctgcatggtagagaacgaggacgag
gagggcgaccctagtaaagagaccatcaccttcctgtacaagttcgtgaggggcgactgt
cctaagagttacggcttcaacgcagcgcggctagcagggattcctggtcagattattacg
gtagcagtacagaaatccaggaaatttgaagaaactatggatcaagtcaagatgtttaga
gagattctgacacacactcaacccgtcaccatcaaaaaaaggcttctctcattaaaagaa
aaaaaatcaagctttgattaa
DBGET
integrated database retrieval system
