Nematostella vectensis (starlet sea anemone): 5518514
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Entry
5518514 CDS
T01037
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
5518514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5518514
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
5518514
U7-dependent histone pre-mRNA processing factors
5518514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_2
T6SS_HCP
Motif
Other DBs
NCBI-GeneID:
5518514
NCBI-ProteinID:
XP_032219122
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MTSIIKLNVLSGAHDEAPLCYLLQVDEFRFLLDCGWNETLDMEIMESIKRHVQQVDAVLV
SFPDIYHMGGLPYLVGKCGLHCPIYTTIPVYKMGQMFMYDWYQCHQNSEEFDVFSLDDVD
AVFDKIIQLKYSQTVSLKGKGHGITITPYAAGHMIGGTMWKIVKDGEEDIIYAVDYNHKK
ERHLNGAVLETLSRPSLLITDSFNALNIQTRRRERDTQLMGEILKTMRRHGNVMIAIDTA
GRVLELSQLLDQLWRNLDSGLSAYSLAMLNNVSYNVIEFAKSQVEWMSDKIMKAFEIGRN
NPYQFRYCHLCHSLADLARVPEPKVVLASMMDLTAGFSRDLFVEWADNPKNTVIFTARSS
PGTLARTLIDNLELKQVELEVKQRVRLGGEELERYLEENKKKEKELHAVDGMPSTLVAED
DSDSEVEDEVASGARHDLMMAEQKSGRKSSFFKQARSFPMFPCHEEKAKWDDYGEFIRPE
DYMQRELSATEEEKQKVEQQKTESVDAELLASQGDLSKVPTKCISQKKTVSIRCTLAFID
FEGRSDGESIKRILNLVNPRKLVLVHGDSKSTQHLADYCQSSSSIQVSQVFTPAVGETVE
ATGERHIYQVKLRDALVSSLQFAQARDAELAWIDGQLDMKLAPANQDLMGDKPGEEKMET
DQDEALDTVPVLEQNTSSKIAGHVSVFINEPRLSDFKQVLNKAGIQAEFAGGVLICNNVV
CVRRNETGRVGLEGTVCEDYYTIRDLLYSQYAIV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccattattaagctaaatgtgctctctggagcccacgacgaagcacctctgtgt
tatctgttgcaagtggatgaatttcgcttcctgctcgactgcggctggaacgagacattg
gatatggagatcatggaatcaataaagcggcatgttcagcaagttgatgcagtactggta
tcatttccagatatataccacatgggagggttaccatatttggtcggcaagtgtgggctt
cactgccctatttacaccactataccagtgtacaagatggggcagatgttcatgtatgat
tggtaccagtgtcatcaaaactcagaggagtttgatgtcttcagtcttgatgacgttgac
gctgtgtttgacaagattatacagctaaagtattcacagactgtcagcttaaaaggcaaa
ggccatggtataacgataacaccctacgccgctggccacatgattggcgggaccatgtgg
aagattgtcaaagatggggaagaagatataatctatgcagtggattataatcacaagaag
gagaggcatcttaatggcgctgtgcttgagacactcagtcggccgtctttgcttatcaca
gactcctttaatgctctaaatatccagacacggcgcagagaaagggatacacagctgatg
ggtgaaatcttgaagacaatgcgtcggcatggcaatgtcatgatcgctatagatactgct
ggaagggttctagagctgtcccaactgctggatcaactatggcgtaatctggactctgga
ctttctgcctattccctggcgatgttgaataatgtcagctacaatgtgattgagtttgcc
aagtcgcaggtggaatggatgagcgataaaatcatgaaagcatttgaaattggaagaaat
aacccctaccaattcagatactgtcatctgtgtcacagcctagcagaccttgccagagtt
cctgagcctaaggttgtattagcaagcatgatggatctcacagcaggattctcccgtgat
ttatttgttgagtgggcagacaaccctaagaacactgtcatatttacagcacgttcctcc
ccggggacccttgctcgcactttgattgacaacctggaactaaaacaagtagaacttgag
gtcaaacagagggtccgtcttgggggggaggagcttgagcgctatttagaggagaacaag
aaaaaggaaaaggagttacatgctgttgacggcatgcccagtaccttggttgccgaggat
gacagtgacagtgaggtggaggacgaggttgcaagtggcgcacggcatgatctcatgatg
gcagaacaaaagagtgggcgtaagagcagtttcttcaagcaagcgaggtccttcccaatg
ttcccttgccatgaagagaaggctaagtgggatgactacggcgagttcatcagacctgaa
gactatatgcagagagagttatcagcaacagaggaagagaagcagaaagttgagcaacaa
aaaactgagtccgtggatgcagagctcttggcatcccaaggagatctctccaaggtccct
accaagtgtatctcccaaaagaagactgttagcatcaggtgtacattggcttttatagac
ttcgagggacgttctgacggagaatccatcaagcgtatcctgaatcttgtgaaccccagg
aaactggttctagtccatggggactccaagtccacccagcatttggcggattactgtcag
tcaagcagcagcatccaagtgagtcaggtgttcacgcctgctgtgggggagacggtggag
gcaactggagagaggcacatttaccaggtaaaattgcgtgacgcgttggtgagctcgtta
cagttcgcgcaggcacgtgacgcagagctcgcgtggattgatgggcagttggacatgaag
ctggctccagccaatcaggacttgatgggcgacaagcccggtgaggagaagatggagact
gatcaggacgaggcgctagatactgtaccagtattggagcagaacacgtctagtaagatc
gcaggtcacgtgtccgtgtttattaatgagccccgcctctccgacttcaagcaagtgctc
aacaaggcaggcattcaggcggagttcgcaggcggagtcctcatatgcaacaacgtggtg
tgcgtgcgtaggaacgagacgggtcgagtcggactcgagggaactgtttgcgaagactac
tacacgattcgggaccttctgtattcacaatatgctattgtctag
DBGET
integrated database retrieval system
