Nematostella vectensis (starlet sea anemone): 5519032
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Entry
5519032 CDS
T01037
Name
(RefSeq) contactin-6 isoform X1
Organism
nve
Nematostella vectensis (starlet sea anemone)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
V-set
Ig_6
Sp38
C2-set_2
Ig_5
Pur_ac_phosph_N
Noda_Vmethyltr
Adeno_E4
Motif
Other DBs
NCBI-GeneID:
5519032
NCBI-ProteinID:
XP_032219789
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MTLTPVPSVRNNSEKLGMLKIQLLLYLLILGSLEALGSTSKPQIIVGPKDTLVHGTSFTL
MCIATKDSTVTWYHDGNRIDFQWQTNMQQSKDGSLHVSNAISSRDKGPYRCVVSNSRGTI
ISRRANVKFPYLMPFAVTNFVIGKEESHSAVLHCQAPDSYPDRQIQWSKQDPNFPGRRRP
LPQSSKYTISSEGDLHFAYLEQSDSGDYVCTVTNNNINKQQVRTVVLNVMPVRPLIPQPP
KVSTEFSVTKIALKGERFVLECIVYGMPVPKITLRKKGVHMILGQVTGNARRHYIPKFTA
NHAGKYKCKATDTSGRTDTSTTIVRMEAKPEWITRPQDTIAGVNSNTTLRCHASGAPRVF
YQWYCNGQPLVTSQRHILHQGDLILKELRYSDGGMYQCVVTNTHGQLIASAELTVAETPA
GFGQGSRAPEASKNALVDSTVTLHCQPSGNPKPMVRWRKGSVYLSSGPRYQFLTSGDLKI
SNVTSLDSGRYTCEVSNRLGSASRTGRLNVQDKIAVTHPPDNKIATVGGTVRFTCGVTTS
GVTEVVFQWRRFVFLLQPSSRISMGKIGEQTGFLEIRGVEFSDQGLYACKATGSIQKDDA
SSEAFALLNVQGAPEKPHGVTILPNTQFSHLVNLTWKLGRDNGSPITHVIIQQHVGSASD
KWTVAKVIRDPKTRIAEVTLSPWAEYKFRVIAGNAIGNSTPSQVSMSVSTRPEAPSKFPS
GIKSKGKGPNTMQITWKPLSRLEENAPGIYYIVYYKRADVKDAMKRNEVHNKTRFTIVGT
DYYVKYAFQVQAANDRGFGPKSGIMFGFSGERYPVGRPTNLKIEITSPTSALATWTSIVD
SREVAGGKLLGYKVYFWTDVTDIRPGKSPFKSSIRASTVLDLDAFTSYRFQVVAFNGRGD
GPGSNIVGPIRTPMASLEEENKSAKRQSPDPTPRILTPDIYRIPDPPAAIVVGMQNTSYV
VLSWHPPIKPNGPILSYSVSVKRLSDGKTVSGETNGTTELRVHNLNLRSRYQFAIMARNH
IGASPPVVGEFDMKLIPQKPPTFVRVNYDEFQREAEVTWIRVASRVDGYKVYYWGEDNIV
ESVDVDMDRNKRTITRLENGHVYQFQVAAFRLVDGQHFVIGPRSDPVKAGRAPVQAKVES
TSDCIHLSGTGTSLALATWGMLYLLYS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacactgaccccagtgccttcagtaagaaataattctgagaaacttggaatgttgaag
atacaactgttgttgtatctgctcattttgggcagcttagaagctctgggctccacttca
aagccacagattatcgttggacccaaggacactttagttcatgggacgagcttcaccttg
atgtgcattgcaaccaaggactccacagtcacatggtaccatgatggaaacaggattgac
tttcagtggcagacaaacatgcagcaatcaaaagatggctcccttcatgtatcaaatgcc
atcagttcacgtgacaaggggccgtaccgatgtgtggtttctaattctagagggactatc
attagcagaagagccaatgtcaaattcccttacctcatgcctttcgcggttacaaatttt
gtgattggaaaagaggaaagccacagcgctgtgcttcactgtcaggctccggattcttat
cctgataggcaaattcagtggtcaaagcaagacccaaactttcccgggcgacgacgacct
ctgccccagtcctccaagtacacgatcagctccgaaggcgatttgcattttgcataccta
gagcaatcagactctggagattacgtatgcactgtcacaaacaacaacatcaacaagcag
caagtacggaccgtcgtgcttaacgtcatgcctgtgcgcccgctcatccctcagccgcca
aaagtctccacggagttttccgtgacgaagattgccctaaagggggaacgctttgtcttg
gaatgcatcgtgtacggaatgcctgtgcccaagataacgctccgcaagaaaggcgttcac
atgattctaggtcaagtgaccggtaacgcgcgccgtcactatatcccaaagtttaccgcc
aatcacgcgggcaagtacaaatgcaaggctacggacacgagtggcagaacagacaccagt
accaccatcgtcagaatggaagccaagccagagtggatcacgagacctcaagacacgata
gctggcgtgaatagtaacaccacgctgaggtgccatgcctcgggcgctccgcgcgtgttc
tatcagtggtactgcaatgggcaaccgctggtcacatcacaaaggcatattctacatcaa
ggggaccttattctcaaggagctgaggtacagtgacggtgggatgtaccagtgcgtggtt
accaacacacatggacagttgattgcatccgctgaactcacggtagccgagacgccagca
ggatttggccagggaagtcgcgcgccagaagccagcaagaatgcgcttgtagactctact
gttacgcttcattgtcaaccctcgggaaaccccaaaccaatggttcgctggcgcaaaggc
tctgtttacttgtcaagcggccctagataccagttccttacatccggggacctcaagatc
agtaatgtgacgtcactggatagcggccgctacacgtgtgaggtgtctaacaggctaggc
tccgcctccaggacagggaggctaaatgtgcaagacaagattgcggtgacccacccaccg
gataacaagattgctactgttggcggcaccgtccgcttcacctgcggtgtgaccacgtcc
ggagtgacggaagtagtttttcagtggaggcgatttgtgttcctgcttcaaccaagttcg
cgaataagtatgggcaaaatcggcgaacaaactggctttctagaaattcgcggagtagag
ttctcggaccagggtctatacgcgtgcaaggcgacaggatccatccaaaaggatgacgcc
tcttctgaggcctttgctcttctaaatgtacaaggagcgcccgagaagcctcatggcgtc
accatcctccccaacacccagttctcacacctagtgaatctcacgtggaaacttggccgc
gacaacggcagcccaatcactcatgtgattatccagcaacacgtagggtcggcatcggac
aagtggaccgtggccaaggtcatccgggacccgaagacgcggatagctgaagtgaccctc
tcgccatgggcggagtacaagttcagagtgattgctggaaatgcaataggaaacagcacg
cccagtcaggtgtcaatgtcagtcagcacaaggcctgaagctccatcaaagtttccaagt
gggatcaagagtaaaggcaaaggccccaataccatgcagatcacatggaagcctctttcc
cgcttggaggagaacgcgcccggcatttactacatcgtatattacaagcgcgcagacgtg
aaagatgccatgaaacgtaacgaagttcacaacaagacgcggttcaccatcgtaggcacg
gattactacgtgaagtacgccttccaggttcaggctgccaacgaccgcggttttggtccc
aaaagcggaattatgttcggcttctcaggcgagagatatcctgtgggcagaccgaccaac
ttaaagatagagattacttcgccgacgtctgctcttgccacgtggacatctatcgtagac
tcacgagaagtggctggaggaaagctactgggatataaggtgtacttctggacagacgtg
acagatatccgcccgggaaagtcgccattcaaatccagcattcgagcctccaccgtgctc
gacctcgacgcgttcacttcctatcgtttccaggtcgtcgcgttcaacggcagaggagat
ggcccgggttctaacattgttggtccgatccgaactccgatggcaagcttagaggaagaa
aataaatcagctaaaagacaatctcctgatccaaccccaagaattctcactccagatatt
tacagaatacccgacccccctgcggcaattgtggttgggatgcagaatacctcttacgtg
gtattgagctggcatccccccatcaaacccaacggtcctatcctgtcgtacagcgtctca
gtaaaaaggctgagtgacggcaagactgtaagtggcgagacaaacggtacgaccgaactc
cgagtccacaacctcaacctccggtccagataccagtttgcgatcatggccagaaaccat
atcggcgcgagtcctccagtggtcggagagttcgatatgaaactaattcctcaaaaacct
cccacgtttgtgcgagtcaattacgatgagtttcagcgcgaggctgaggtcacgtggata
cgcgtggcgtcgcgcgtggatggatacaaggtgtattactggggcgaggacaacatagtc
gaatcagtggatgtcgacatggaccggaacaagcgcacaataacgaggctggaaaacggt
cacgtgtaccagttccaagttgctgccttccgattggttgatggacagcactttgtgatt
ggcccgcgttcagacccagtaaaagcaggaagagctcccgtacaagccaaagtggagtct
acgagcgactgcatacatctgtcggggactggaacaagtctcgcgctcgccacgtggggc
atgctatacctactgtatagctga
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