Nematostella vectensis (starlet sea anemone): 5519186
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Entry
5519186 CDS
T01037
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04986
polycystin 2
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nve03037
]
5519186
04040 Ion channels [BR:
nve04040
]
5519186
Cilium and associated proteins [BR:
nve03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
5519186
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5519186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_1
EF-hand_5
EF-hand_7
EF-hand_6
Fer4_24
DUF6693
Csm1_B
Motif
Other DBs
NCBI-GeneID:
5519186
NCBI-ProteinID:
XP_032219880
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MSTGSAKRRNKPTGSQASLGLSMNDEMEMHEKSGRPASSNSRAAWSEDDLLTGQGGDEID
FSSPRAPASAAVDVMPSAMEAEPVSHQKRIAADVRVPGAKNVPVGCWTRFKRIIRGLWRT
RQTEDTDSDREMHIKTTLRELIIYLVFITILCILTFGMTSSTMYYFTKVMRDLFVESSMS
NRNTFKDITTMNEFWMYTTETLSDGLYWEQYYNNQNVTKPKDDLGFIYFENKILGRPRFR
QLRVLNDSCTVHDDFKSVIKECYAAYSPNVEDMNTFGKMNGSAWTYQTEKDLQGRSYWGR
MTTYSGGGFTQLLAPTKAETQQIIEDLKQNLWLDRGTRAVFIDFTVYNANINLFCIVRLV
FEYPPTGGCIPSFNFRTVKLIRYVDTFDHFVMACEGIFILFIIYYTIEEGLEIKKHKMKY
FKSFWNVLDVVVIMLGYVAVVFNLYRTMAVGDLLSSLLEDGSQYANFDSLGFWQTQFNNM
VAVAVFFAWIKVFKYISFNKTMTQLSSTLSKCAKDVAGFAIMFFIIFFAYAQLGYLIFGT
QVRDFSTFEDSIFTLFRIILGDFDFHQIENANRVLGPLFFMTYVFFVFFVLLNMFLAIIN
DTYAEVKSDIASQESEFEITDYFKKGYQNMLNKLSFKREKILDIQKALKSADVNQDNKLD
FEEWRANLKSRGHADAEIEAVFAKYDLDGDRILDEDEQRRMQEDLEGQKAELNDEIEEME
RQKESRPKSASRMSFRGSDADSDDDDDDSQGGLSGRVGSAAGHRRGGGGGGGVSYEEFNV
LSRRVDRMEHSIGSIVSKIDAVLVKLEAMEKAKLKRRETMAKLLDSITESDRSGRSEDEK
KREQMERMVREELERWDSEASMSRGDASRGASPSASRANTAKSRGAASMGNRSASRGSVQ
GSAASVRVPVREDERKPSFGDTTNV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagggtcggcgaagcgacgaaataaacctacgggttcgcaagcaagtcttgga
ctcagcatgaacgacgagatggagatgcacgagaaaagtggacgacctgcctcgtccaac
tcacgagccgcttggtcggaagacgatctgctgactgggcaagggggagatgagatcgat
ttctcctctccgagagcgccagcctcggccgcggtcgatgttatgcctagtgcgatggag
gctgaacccgtcagccatcagaagcgaatcgcggcggacgtgcgcgttccaggggcaaag
aacgtgcctgttggatgttggactcgattcaagcgaattatccgaggactatggcgtacc
cgacagacagaggacacagactcagacagagaaatgcacatcaagacgaccctccgagaa
ctgatcatctacctggtattcatcaccatcctctgcatcttgacttttggtatgaccagc
tcaaccatgtactactttacgaaggtcatgagagacttatttgtcgagagcagcatgtca
aaccgcaacaccttcaaggacatcaccaccatgaacgaattctggatgtacaccaccgag
actctttctgatggtctctactgggaacagtactacaacaaccagaacgtcactaagccc
aaagatgaccttggatttatctactttgagaacaagatccttggccgacctcgcttccgc
cagcttcgtgtgctcaacgactcttgcactgtccatgacgacttcaagtctgttatcaag
gagtgctatgccgcctactccccgaacgtggaagacatgaacacatttggcaagatgaac
ggatcggcctggacgtaccaaacagagaaagacctgcagggacgctcctactgggggcgg
atgaccacctacagcggcggcggattcacacaacttctcgccccgaccaaggcagaaaca
cagcaaatcattgaggatctcaagcaaaatctttggcttgaccgtggaactcgtgctgtg
ttcatcgacttcaccgtctacaacgccaacatcaatcttttctgcatcgtcagactggtg
ttcgagtacccccccactggtggctgcatcccctccttcaacttccgcaccgtcaagctg
atccgctatgtcgacactttcgaccactttgtgatggcgtgcgaggggatctttatcctg
tttattatctactataccatcgaggaaggtctcgagatcaagaagcacaagatgaagtac
ttcaagagtttttggaatgtcctggatgtggtggtgattatgcttgggtacgtggcggta
gtctttaacctgtaccgtaccatggcagtcggggaccttctcagcagtctcctggaagac
ggctcgcagtatgccaactttgactcgctgggattctggcaaactcagttcaacaacatg
gtggccgtggcagtcttcttcgcctggatcaaggtgttcaagtacatcagcttcaacaag
accatgacccagctgtcctccaccctctccaagtgcgcaaaagacgtggccggattcgcg
attatgttcttcatcatcttctttgcctacgctcagctcggctacctcatctttggtacc
caagtgcgcgacttcagcacttttgaggacagcatcttcacactgttccgtatcatcctt
ggtgacttcgacttccaccagatcgagaacgccaaccgtgtgttgggtccgctgttcttc
atgacctatgtgttcttcgtcttcttcgtccttctcaacatgttcctcgctatcattaac
gacacctatgccgaggtcaagtctgacattgcctcgcaagagagcgaatttgagatcacc
gactacttcaagaagggatatcaaaacatgcttaacaagctgtccttcaagagggagaaa
attctggacatccaaaaagctctcaagtcggccgatgtcaaccaagacaacaaactggac
ttcgaggaatggcgcgccaacctcaaatcacgcggccatgccgacgcagagatcgaggcc
gtgttcgccaaatacgatctggacggcgacagaatcctggacgaggatgaacagagacgc
atgcaggaggacctggagggacagaaggcggagctgaatgacgagatcgaagagatggaa
cgccaaaaggagtcccgcccgaagagcgccagccgcatgagcttccgcggcagcgacgcc
gacagcgacgacgacgatgatgactcgcagggcggactgagcggcagagtcggatctgca
gccggacacagacgtggaggcggcggaggaggaggcgtgtcttacgaggagttcaacgtg
ctgagccgccgtgtggaccgcatggaacactccattggcagcatcgtctccaagattgac
gccgtgctcgtcaagctggaagccatggagaaagccaagctcaagcgccgtgagaccatg
gccaagcttctggacagcatcaccgagagtgaccgctctgggcgaagtgaggacgagaag
aagagggagcagatggagcgcatggtccgcgaggagctggagcgctgggatagcgaggct
tccatgagccgaggagacgcgtcacgtggggctagccccagtgcctcacgcgctaacaca
gccaaatcccgcggcgccgcgagcatgggcaacagatctgcatcccgcgggtctgtgcaa
ggaagcgccgcttctgttcgtgttcccgtgcgagaggacgagcgaaaaccatcgtttggt
gataccaccaacgtgtaa
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