Nematostella vectensis (starlet sea anemone): 5519402
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Entry
5519402 CDS
T01037
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5519402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nve03041
]
5519402
Spliceosome [BR:
nve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
5519402
Complex C
U4/U6.U5 tri-SnRNP related factors
5519402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Peptidase_M26_C
Motif
Other DBs
NCBI-GeneID:
5519402
NCBI-ProteinID:
XP_032220073
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MEAEDFESKQPTKKQNTLPLWGSERTMNMNNMILTNILQSPYFKNELYQLKTYHEVVDEI
YYKVDHLEPWEKGSRKTSGQVGMCGGVRGVGAGGIVSTAYCLLYKLFTLRLTRKQLNGLL
THTDSPYIRALGFMYIRYCQPPADLWEWYEPYLEDEEEVDPKAGTGCTMTMGQLVRSFLL
KLEWYGTLFPRIPVPIQKDLEKKLKEKNLCDDHKKKADGTWEATQESPNRRPGAENGREN
TDRSRRSAESDSRPKRSRSRSRDHSSRRNSRDKSRDPDRDRPRDSERDRYRDIERDRHRD
RRHSRDRDRKRSRSRDRRKSRSRSRDRRRSRSRERRRDDRKRRSRERSPKRRSREREESR
SRHRGRSNSR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggaggattttgagtcgaaacaaccgactaaaaaacaaaacacgttaccgtta
tggggcagcgaaaggacgatgaacatgaacaacatgattcttactaacattttacaatct
ccttacttcaagaacgaattataccagctaaaaacatatcatgaggtagtcgatgagatt
tattataaggtcgaccatctggaaccttgggagaaagggagtcgcaagacatcaggccaa
gtgggcatgtgtggcggggtgcggggtgttggtgctggcggcattgtctctactgcatac
tgcctcctatacaagcttttcaccctccgtctgaccaggaaacagttaaatggcttgcta
acgcatacagactctccatatattcgggctttgggattcatgtacatcagatattgccag
ccaccagcagacctgtgggaatggtatgagccgtacctagaagatgaggaggaagttgac
cctaaagcaggcactgggtgtaccatgacgatgggacagcttgtacgcagcttcctcttg
aagttagaatggtacggcacccttttcccccgcattccggtccccatccagaaggatctg
gagaaaaagctgaaggagaagaatctctgtgatgatcataagaaaaaggctgatgggacg
tgggaggcaacccaagaaagcccaaacagacgacctggagctgaaaacggtcgagagaac
accgatcggtcacgcagaagtgcggagagtgactctagacccaaaaggtcacgcagcaga
agccgtgaccattccagtcggcgcaacagccgtgacaagtcacgcgatccggaccgtgac
agaccacgtgactctgaacgtgacagatatcgtgatattgagcgtgacagacaccgtgac
agacgtcacagtcgagaccgagatcgcaaacgcagccgtagtcgcgaccgtagaaaaagc
cgcagtcgaagtcgtgacaggagaagaagtagaagccgggagcgaagacgagatgacaga
aagaggaggtcacgtgaacgcagtcccaagcgacgtagtcgtgagcgtgaagagtctaga
agcaggcatcgcggaaggtctaacagtaggtag
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