Nematostella vectensis (starlet sea anemone): 5519444
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Entry
5519444 CDS
T01037
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
5519444
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5519444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
5519444
NCBI-ProteinID:
XP_001639406
UniProt:
A7RMH3
LinkDB
All DBs
Position
Unknown
AA seq
1597 aa
AA seq
DB search
MSNKRIEREPAVKSHVTCAPRRPRSCIYPLTRDSGSRGSRYERLRTSTYSDIPENSKGLG
NSTNAKVTGTKDGKLKTSTFRSSPRLNKSPVIRKGNVAQKKEPVRTSSLREVSEKSVDKS
SEHREPGAIKGGWFQRLSHPMLANLKRKVNEKLHRESDDCAHNNDVISSRPSHEGVEPRD
PHVLSLRPIKGASNRNLSDNVTSGNTCDSLAVRKLSDSKACSSAVNSLRIVNDWKAWKNR
DDHSDDVKPGLKRDCKTMFLVVDLPCKLNHEFPMPEKWAQNAHASGGIPQLLTQSASSTV
GSDDSYGRDMDGFLGRAESSEREYAGRQALYERLQRKADARKAAESRERTYDDTYISRDA
NANDVQPESNRETPCQDTEIRVNVKKRHSTHQVFGELPESVEAYCGRQTKGEPTPSDGTI
TLTYSGPHDDHRTDSDTDNDDTPRPIPPALGVPTPPRKNSFGLHAMAPLYRGRISVLEAE
KEVLLEMNATLRDENEALRRMTCLMTKGDASSLDVEQPNASNGDSRPSEISLLPRLSHGR
LPSLATLTRINLRFNREHHGCLHRAVLNGNEEEVESFLSAGKDINAHDEYGKTPLHCAVG
AQKLNIVLCLLSYRPDIDAHDDRDDTPLHTAVRTGNIDIVKALLKEGHADSNKVGNAGCT
PLHVAAQLEHANNVTICQILLDHNAKLLSRDHKYMTPIAHAALHGSYDVMISLFHHAKCQ
GIPKDDLLFEVDGVGSTLLHLAVESGSARVVELCLDEGAAPHSVKSQDGSTPVHLACSYG
YMDILDILMKAVAFILDPPPDQDGMLPIHRAAQSNHHEVIAYLLKQDTDQVDAIDHLGRT
PIMLAAENGCFESVRVLLDHNANVDIRDSENKTVLHYAIGVAEILKEILKDVKANSLIRA
KDRLGNTPLHYAARHGCVKDVSIILMKYKASAAIVNGIGEIPLHIGARNGWIAVVKKLTE
GRGKRTMNANDANERTPLHLAAREGHDELVEFFLKRGARIDRDVQGQTPLHYAARQGSKK
ALELILENKPDCLNVTDKNQNTAIHMAALGGHAEILEFLLSKPEQVVSVNERNQNILDIA
IEERHENVAMKIAENKRWKEVVRSTVHGTYTQIQLLVRHMPAVAKKFLDRCVETEGDPEK
EDYKVSYDLKFIQGMPDERKKTKYIRESLIALHTMVKYERLECLTHPLCSVLMDIKWRKF
GLVCAFLNQAVYLIYISLIMVIMQYIVSFTKHNMENVASNTTIKEDPLIVKSFRDDPLIA
AVAVVLIIACVYNLAKEFFQMFDEGWNYFFSINNWMEVTLYVMTFVTIVRPRGTDLAELA
VCVFLAWIVLLHYISKFNYVGLYIVMIRKTVMTVFKVLIILLIFLAAFAFSFHVITVPLT
NVEVAKTRFSNLSASLAATFFMILDNLRYDEIVLNYSVNSTGTSTGSAIVLNILFISYCF
MMPIIFLNLLIGLAVGDIDNIRKTAAMERYTSQVEHLSQLERALPTFILSKVQVTEYVEH
PNRKKNFKDKIVNLLVMLLSPRQEQDKKLEHQTNMEERVQRHEAELRDISAILRKHSVLL
EELRDLLQDRKIRGTVSGEGVETGPTNSPDTNSEFFV
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaagcgaattgagagagaaccagcagttaaaagtcacgtgacgtgtgccccc
cggcgtccacgctcatgcatttatccgctgaccagagatagtgggtctcgcggtagccga
tacgaaagacttcgcacgtcgacatactcagatatcccagaaaattcaaagggacttgga
aattcaactaatgccaaagtgacaggaacaaaggatgggaagttaaagacttcgactttt
cgttcatccccacgattaaataaatctcctgttattcgaaagggtaatgttgcacaaaag
aaggaacctgttagaacatcaagtcttcgagaggtatctgaaaaatccgtggataaaagc
tcggaacaccgggagcctggggctataaaaggggggtggtttcaaaggctgtcacacccc
atgcttgcaaatttaaaaagaaaagtcaacgaaaagcttcacagagaaagtgatgattgt
gctcacaacaatgacgtcattagttccaggccttctcacgaaggtgttgaaccacgtgac
ccccacgtgttgtcattaaggcccataaaaggagcgtccaatcggaacttaagtgacaac
gtcactagtgggaatacttgcgattcattggctgtccgtaagttgagtgacagcaaagcg
tgcagtagtgctgtcaatagtttgcgcattgtcaatgattggaaagcttggaaaaataga
gacgatcattcagatgacgttaaaccagggcttaaacgggactgcaagactatgtttctc
gtcgttgatttaccgtgtaaactcaatcacgagttccctatgccagagaaatgggcacaa
aacgcgcacgcatcaggtggaataccacagctgctgactcaaagtgccagctcgactgtg
ggctcagatgattcatatggaagggacatggatggattcctgggacgagcagagagtagc
gagcgtgaatatgctggccggcaagctttgtacgaaagactgcaacgcaaagcggacgcc
cgcaaggctgcagaatcacgtgaacgaacgtatgatgacacgtacatatcacgtgacgca
aacgctaacgatgttcaaccagagagcaacagggagacgccttgtcaagatactgagata
cgtgtaaatgtaaagaaaaggcattctacccatcaagttttcggtgagcttcctgaatcc
gtcgaggcctactgtggcagacagacgaaaggagaacccacacccagcgatggcacgatc
acattgacatacagtggtccacatgatgatcacagaaccgactcagacaccgataatgat
gacacaccccgtcccatccctccagcgttaggcgtccccaccccacccaggaagaacagt
tttggtctccacgccatggcgccgttgtatcgtgggcgtatctcggtcctggaggcggaa
aaggaagtcctgcttgagatgaacgcgactctacgggacgaaaacgaggcgcttcggcga
atgacgtgcttgatgacaaagggagacgcttcgtctttggatgtggagcagcccaatgct
tctaatggagactccaggccgtcggagatttctctacttcccaggttatcccacgggaga
cttcccagcctcgctactctgacccgcataaatctccgcttcaaccgagagcaccatggc
tgtttacacagagcagtgctcaatgggaacgaggaagaggtcgaatccttcctctctgcc
ggaaaagacatcaacgcgcatgacgagtacggaaaaacaccgctgcactgtgctgtaggc
gcacagaagctgaacatcgttctatgcctgctgagttatcggcccgacattgacgctcat
gacgaccgcgacgacacgccattgcacacggctgtacgcacgggaaacattgatatcgtc
aaggccttgctgaaggaaggtcacgcagactctaataaggtcggcaatgctggctgcaca
cctcttcatgtggcagcacagcttgagcatgccaataacgtcaccatctgtcagattctg
cttgatcataacgccaagcttttgtcacgtgatcacaagtacatgacgcctattgcgcat
gcggcgttgcatggctcctatgacgtcatgatttccttattccatcacgcaaaatgccaa
ggtatccccaaggacgacctgctgttcgaggtggatggggttggaagcaccttgctacat
cttgcggtggagagcgggtcggcaagggtcgttgaattatgtctggacgaaggggccgca
cctcattcagtcaagagccaagatgggagtaccccggtacatctcgcgtgttcttatggg
tacatggacatcttagacatcctcatgaaggcagttgcgtttattctcgatcctcctcct
gaccaagatggcatgcttcctatacacagagccgcgcagtctaatcaccacgaggtcatt
gcgtacttgctaaagcaggatactgatcaagtagacgctattgaccatctcggacgaact
cccatcatgctcgcagccgagaacggctgcttcgagtctgtgcgagtcctcctcgaccat
aatgcgaacgttgacatccgggactctgagaacaagactgtgttgcactacgccattggt
gtagcagaaatcctcaaagaaattctcaaggatgtcaaggcgaactcgttaattcgcgcc
aaagaccgtcttggtaacacacctcttcattacgcggcgagacacggatgtgtaaaggac
gtttcaatcatactcatgaagtataaagcttctgcagcgattgtgaacggaataggtgaa
atcccacttcacatcggggcccggaatggctggatcgctgtggtgaagaaactgacagag
gggcgtggaaagcgaacaatgaacgcaaacgacgcgaacgagcggactcccctccacctc
gccgcccgggaggggcatgacgaactcgtggaattcttcctcaagagaggagcgaggata
gacagagatgtccaaggtcagacgcctctgcactacgcagcacgccagggctccaagaaa
gcactagagctaatactagaaaacaaaccagactgtctgaacgtcactgataaaaaccag
aacacagctatacatatggcagcgctgggtggccatgccgagatcttggaatttctgctg
agcaaacctgagcaggtcgtgtccgtcaacgagcgcaatcaaaacatcctcgatatcgcc
attgaggagaggcacgaaaatgtcgccatgaaaatagcagaaaacaaacggtggaaggaa
gtcgtccgaagtacggtacacggcacatatacacaaatacaactattagtccggcacatg
ccagctgtagcaaagaaatttctagaccgttgtgtagagacggaaggtgacccagaaaaa
gaggattataaggtctcgtacgacctaaagtttatccaagggatgcctgacgagagaaaa
aagactaaatatatacgagaatcattaattgctctccacaccatggttaaatacgaaaga
ctagaatgtcttactcaccccttatgctctgtactcatggatatcaaatggagaaagttt
ggccttgtctgtgcttttctaaaccaagccgtctacctcatttacatatcgctcatcatg
gtgataatgcagtacattgtcagttttaccaaacacaatatggaaaacgtggctagtaac
acaaccataaaggaggatccactgatcgttaagtccttcagggatgacccgttgatagca
gcagtagccgtcgttcttatcattgcttgcgtatataaccttgcgaaggagttcttccag
atgtttgacgagggctggaactatttcttcagcatcaataactggatggaggtcacgctc
tatgtcatgaccttcgtgacgatcgtgcgaccgcgtgggactgatctcgcggaactagca
gtatgcgtgtttctcgcgtggatagtactattgcattacattagcaagtttaactatgtc
ggtctgtatattgtgatgataagaaaaacagtgatgacggtattcaaggtcttgattatt
ctattgatattcctcgccgctttcgccttctcatttcatgttatcaccgtccctcttaca
aacgtcgaagtggctaagacaagattctccaatctctctgcctctctcgccgccactttc
ttcatgattttggataacctccgctatgacgagattgtcttgaactactccgtcaatagc
accggcaccagcacaggctccgctatcgtactcaacattctcttcatctcttactgtttt
atgatgccgatcatcttccttaacttactgatcggtttggctgtcggtgatatcgacaac
atcagaaaaacagcagcgatggagagatatactagccaggtggagcacttgtcccagctg
gagagggcgttgcccacgtttattctcagcaaggtgcaggtcaccgaatacgtggaacac
ccgaacagaaagaaaaacttcaaagataagattgtgaatctacttgtgatgctgctgtcg
ccacggcaggagcaggacaagaagcttgaacatcagacgaacatggaagagagggttcag
aggcacgaggcagagttgcgggatatttctgcgattcttcgcaaacactcagttcttctt
gaagagttacgcgaccttctgcaggatagaaagatacgcggaaccgtcagtggtgaagga
gtggagactgggcctactaatagtccagatactaacagcgaatttttcgtgtaa
DBGET
integrated database retrieval system
