Nematostella vectensis (starlet sea anemone): 5519446
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Entry
5519446 CDS
T01037
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
5519446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5519446
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
5519446
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
DUF7510
Motif
Other DBs
NCBI-GeneID:
5519446
NCBI-ProteinID:
XP_032220227
LinkDB
All DBs
Position
Unknown
AA seq
225 aa
AA seq
DB search
MANNSSPRGWPRNRSSSSTGKYLAGGTTIAEKTIRLYPLTNYTFGTKESLYEKDSSVQAR
FQRMREEYEKFGMRKTVEGVLIVHEHGLPHILLLQLGTTFFKLPGGELVPGEDEIDGLKR
SMTEILSRPEHGPEPDWFVEDCLGNWWRPNFEAPQYPYVPAHITKPKELRKLFLVQLGEK
ANFAVPRNYKLVAAPLFELFDNAPGYGPIIASLPQLLSRFQFLYM
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaactccagtcctcgtggttggcctcgaaaccgatcttccagtagcacaggc
aaatacctcgctggtggaaccactatcgcggagaaaactatacgattgtacccactcaca
aattacacatttggcaccaaagaatctctctatgagaaagacagttctgttcaagcaagg
ttccagagaatgagggaagagtatgagaagtttgggatgaggaagacagtggagggagtg
ttgatagttcacgaacatggcttgccacatattctactattacaacttggtacaacattt
tttaaactgccaggcggagagcttgttcccggtgaggatgagattgatggactcaagaga
tcaatgacagagattctcagccgaccagaacatggccccgaacctgactggtttgtggaa
gactgtcttggaaactggtggagaccaaattttgaggcccctcagtatccatatgtccca
gcacacataactaaacccaaagaactaaggaaactgtttctggtgcagcttggggagaaa
gcaaactttgcagtaccaagaaactacaaactagttgccgctccattgttcgagctgttt
gataatgctcctggttatggaccaatcattgctagcctcccacagttacttagcagattt
cagtttttatatatgtaa
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