Nematostella vectensis (starlet sea anemone): 5519458
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Entry
5519458 CDS
T01037
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nve03041
]
5519458
03016 Transfer RNA biogenesis [BR:
nve03016
]
5519458
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
5519458
Spliceosome [BR:
nve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
5519458
Transfer RNA biogenesis [BR:
nve03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
5519458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
5519458
NCBI-ProteinID:
XP_032220210
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MAGHFSEFGMLPEICKAVEDMDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP
VIQIVHETIRDALSGKVSKAPSVSGPSTFKMNPFDRGDTLTIDKEGYLCQSRDFYKWQGC
RSTLGVKKGKYYYEATVTDEGLCRVGWSTAHATLDLGTDEEGFGFGGTGKKSYNRQFDTY
GEPFGINDTIGCYINLDNGTVKYSKNGVDFGKAFDIPQALLGKTFFAAVVLKNAEMKFNF
GDSSFQCPPKGDYIPLSKAPKDVTAAGGDTASIQSKPGKFSNRCAPSAIIIEPSRELAHQ
THAQIHLFQNHLPQPKVKPVLLVGGENAKDQIRQLNDGVDIVTGTPGKLNDFITTDKISL
HQVKFFILDEADGLLAQGNNDLIMKIYNKIPKITAGKRLQIVTCSATLHSFDVKKLAERI
MHFPTWVDLKGQDSVPETVHHVVCHVDPLVDTSWVNLKKKVKTDGIHAKDNIKPNSQSPE
SLSEAVKILKAEYLVKAIDEHKMDSGIIFCRTKLDCDNIEQYLLSLGGGPKAMVDAYSCV
CLHGDRSPQERKTNLQKFKDNEVCFLICTDVAARGIDIQGVPYVINVTFPDDKQNYVHRI
GRVGRADRMGLALSLVSDVKEKVWYHTCPNRGKGCFNTRLKXQGGCSIWYNETQYLADVE
DHLGETIPVIQPDMKVASNEFDGKVVYGAKRGKGAVFQTHTAELAPSVQELAALEQQAQT
SFIDLMHRNWTKVR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcatttctcagagttcggtatgctgccagaaatctgcaaagctgtagaagac
atggattggctattacctacagatgtacaggcagaggccattcccctcatccttggtggt
ggtgatgttttgatggcagctgagactgggagcggcaagactggagccttttgccttcct
gtgatccaaattgttcacgaaacaatcagagatgctctctctggcaaagtcagcaaagca
ccttctgtgtctggcccttccaccttcaagatgaacccttttgacagaggagacacattg
accattgataaagagggttacttatgtcaaagtcgtgatttctacaagtggcaagggtgt
cggtcaactcttggagtgaagaaaggaaaatattactatgaagcaacagttactgatgaa
ggcctgtgtcgtgttgggtggtcgacggcccatgccacactagatctaggcactgacgag
gaaggctttgggtttggtggaactggtaaaaaatcatacaatcgccagtttgacacatac
ggcgagccttttggtattaatgacacaattgggtgctacatcaacctagataatggcact
gtgaaatatagcaagaacggtgtggattttggcaaagcatttgacattccacaagctttg
ttggggaagacattttttgctgctgtagttttaaagaatgccgagatgaaattcaacttt
ggagactcatcattccagtgccctccaaagggcgactacatccctctatcaaaagcccca
aaggatgtgactgctgcaggaggtgatactgcttctattcagtcaaaacctggcaaattt
tctaatcgctgtgctccatcagcaatcatcattgagccatctagggaactggctcatcag
acacatgctcaaatacatctcttccaaaatcacctcccacagccaaaagtcaagccagta
cttcttgttgggggtgagaatgccaaggatcaaataagacaactcaacgacggggttgac
atcgtgactggcacaccaggtaaactcaatgacttcataaccacagacaagataagtcta
caccaggtgaagttcttcatcttggatgaagcggatggtctgctggcccaaggtaacaat
gacctcatcatgaagatttacaacaaaattcctaaaatcacagctggcaaacgactccag
atagtcacatgctctgcaaccctccattcatttgatgtcaagaaattagcggagcgtatc
atgcactttcctacatgggtggacttgaaaggtcaagatagtgttcctgaaacagtacat
catgtggtttgccacgttgacccacttgttgacacctcctgggtgaacttgaagaaaaaa
gtcaagactgatggcattcacgctaaggacaacatcaaacccaacagccagtctccagaa
tctttgtctgaggcggtcaagatcttgaaagcagagtatctggttaaagccattgacgaa
cacaaaatggattctgggatcatcttctgccggactaaacttgactgcgataacattgaa
caatatttactcagcctgggcggaggacccaaggccatggtggatgcgtactcttgcgtg
tgtctacatggagatcggtcaccccaagagcgcaaaactaatttgcagaaattcaaggat
aatgaggtctgttttctaatctgcaccgatgtggctgctcgtgggattgacatccaggga
gtcccatacgtgattaatgtgacgtttcccgacgacaagcagaactatgttcacaggatc
ggccgagttgggcgagcagataggatgggccttgcattgtccttggtttctgacgtcaaa
gaaaaggtttggtaccacacgtgtcccaacagaggcaagggctgcttcaatactcgacta
aagnaccagggaggctgctctatctggtacaacgagactcagtatttggctgacgttgaa
gatcacttgggagagacgatcccggttattcagccagatatgaaagtggcttctaacgag
tttgatgggaaagttgtttacggagcgaagcgtggcaaaggtgcagtgttccagacgcac
acggcagaactagcgccgtccgttcaggagttagcagctctcgaacagcaggcccagacc
tctttcatcgatctcatgcaccggaactggaccaaagtgcggtga
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