Nematostella vectensis (starlet sea anemone): 5519699
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Entry
5519699 CDS
T01037
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
5519699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5519699
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
5519699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
5519699
NCBI-ProteinID:
XP_032220362
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MSRHRNIRNYAYEDDMSEDVYGHSVEDYDMAVSPTTAHQFMYSRGDNHPDLFSNYMGGRF
GSVEEEKEEEEEEENSLTSSQDYKRPQLDALSEAKLSSCLDQLNSILGDDCHEPTAVDAI
LKHDFNVEKALDYIFNRETKQDKSCESNKGTGHPLSVHPPQPSLLSAPAKIKPTPAPIFV
GLPKAKAESVVASAVAANKVSSNVVLGFTTSREEKRSSATSSPDQQNMSPATEASRSPEL
KQKSKAKDRLDAKAELEKRHQGKELLNLVIIGHVDAGKSTLMGHLLFLLGDVSKKAMHKY
ETESKKAGKASFAYAWVLDETGEERERGITMDVGLTRFQTKNKVITLMDAPGHKDFIPNM
ITGAAQADVAILVVDAITGEFEAGFESGGQTREHAILVRSLGVTQLIVAINKLDMMSWSE
ERYLHIVSKLKHFLKQVGFKDSDVVYVPVSGLSGENLVKPCTEEKLKKWYQGQCLVDRID
EFKSPKRDMDKPWRFCVSDVYKGLGTGINLAGKMEAGHIQTGDKALAMPAGEKGLLKALN
IHDEPTQWACAGDHVTLTLSGIDMMHVGVGTVLCDPASPIRGTCRIKARIIVFNIEVPIT
NGFMVLFHYQNLSEPATIKKLHALLNKSTGEVIQRKPRCLPKNSNAEVELQTSRPVCVEL
YKDYKDLGRFMLRYGGDTIAAGVITQIM
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcacaggaatattaggaattatgcctatgaagatgacatgtctgaagatgtt
tatggccattctgttgaggactatgacatggctgtatcccctaccactgctcaccagttc
atgtacagtagaggtgataatcacccagacttgttcagcaactacatgggcggcaggttt
ggtagcgtggaagaggaaaaggaggaggaggaagaggaagaaaactctttgaccagctca
caggactacaagaggccacaactggatgctttgagtgaagccaagctgtcttcctgtctt
gatcaactgaactccatccttggggatgactgccacgagccaactgctgttgatgccatc
ttgaagcatgactttaatgtggagaaggcactagattatatcttcaacagagaaaccaag
caagacaagtcctgtgaatcaaataaaggtacaggtcaccccctttcggtacatccaccg
cagcctagcctcttatctgctcctgccaagatcaagccaactccagcacccatctttgtt
ggtctccctaaggctaaagcagagtcagttgtagcatctgcagtggcagcaaataaagtg
tcatcaaatgtggtcctggggtttaccacttcaagggaggagaaacgatcgtctgctacc
agttcgcctgaccagcagaacatgtctcctgcaactgaagcttccaggtctcctgaattg
aaacagaaatccaaggccaaggatcgtttggatgccaaggctgagctggaaaagaggcac
cagggaaaagagcttcttaacttggtcatcattggtcatgtagatgctggtaaaagcaca
ctgatggggcatctcctcttcttgcttggagatgtttccaagaaagcaatgcacaaatat
gagacagaatccaaaaaagctggcaaggcatcatttgcttacgcctgggttctggacgag
actggggaagaaagagaacgtggcatcacgatggatgtcggcctgacaagattccagacg
aaaaataaagtgatcactttgatggatgcacctggacacaaggacttcattcctaacatg
atcactggtgctgcccaggcggatgtggccatacttgtcgttgatgcaattactggcgag
tttgaagcaggttttgagtctggtggacagaccagggagcatgctattcttgtccggtca
cttggcgtcacgcaactcattgtggctattaataagctggatatgatgtcttggagcgag
gagagatatttacacattgttagtaagctaaagcacttcctcaagcaagttggatttaag
gattctgatgttgtttatgttccagtcagtggtctgtccggagaaaatttagtgaaacct
tgcactgaggaaaaattaaagaaatggtaccaagggcagtgtctcgttgacagaattgat
gaattcaagtctcccaaacgtgacatggacaagccttggaggttctgtgtgtctgacgtt
tataagggtttgggcacagggataaatcttgctgggaaaatggaagcaggtcatattcag
acaggggataaggctctcgcaatgccggctggcgaaaaggggcttcttaaagctttgaat
attcacgacgaaccgacgcagtgggcatgcgcgggagatcacgtgaccctcactttatcc
gggatagacatgatgcatgtcggtgtgggcacggtgctgtgcgacccggcctcccctatc
cggggcacgtgccgtattaaggcccgaatcatcgtgttcaacattgaagtgcccatcacc
aacggattcatggtcctgttccattatcaaaacttaagcgagcctgctactatcaagaag
ttacacgcactgctgaacaagagcacaggggaagtgatacagagaaagccgaggtgtctg
ccaaagaattcaaatgctgaggtcgagctccagacatctcgtcctgtctgtgtggagtta
tacaaggattacaaggaccttggccggttcatgttgcgctacggcggggacactatcgct
gctggcgtcattacacagataatgtag
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integrated database retrieval system
