Nematostella vectensis (starlet sea anemone): 5520710
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Entry
5520710 CDS
T01037
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03013
Nucleocytoplasmic transport
nve03015
mRNA surveillance pathway
nve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5520710
09122 Translation
03013 Nucleocytoplasmic transport
5520710
03015 mRNA surveillance pathway
5520710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5520710
03041 Spliceosome [BR:
nve03041
]
5520710
03009 Ribosome biogenesis [BR:
nve03009
]
5520710
03012 Translation factors [BR:
nve03012
]
5520710
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
5520710
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
5520710
mRNA cycle factors
Stress granule specific factors
5520710
Spliceosome [BR:
nve03041
]
Complex C
Other components
EJC/TREX
5520710
Ribosome biogenesis [BR:
nve03009
]
Eukaryotic type
90S particles
Helicases
5520710
Translation factors [BR:
nve03012
]
Eukaryotic type
Initiation factors
eIF-4
5520710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
5520710
NCBI-ProteinID:
XP_001640523
UniProt:
A7RIU5
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MRGYFLSSQICSKMASRVERRVVTDETEGEDLSKIEFETSEDVEVLPTFDAMKLREDLLR
GIYAYGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALV
LSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMI
RRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSK
FMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVD
WLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVIN
YDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggttactttctttcttcacaaatttgttcgaagatggcgtctcgtgtagaaaga
agagtcgttacagatgaaacagaaggtgaagacctcagtaaaatcgagtttgagacctca
gaagatgtagaagttttgccaacgtttgatgctatgaagctaagagaggatttattgcga
ggaatatacgcttatgggttcgagaaaccttctgccattcaacagagagcgatcaaaccg
atattaaagggacgagatgttattgcacaggctcagtcaggaactggaaaaactgccaca
ttttccatctccgtacttcaagccattgacacacagttaagggagccacaggcattggta
ctgtcgccaacacgcgaacttgccaatcaaatccagaaagtagtcctggcccttggggac
tacatgagtgtgcaatgccatgcttgtatcggaggaaccaacattggcgaggacatccgc
aagctggattatggacagcacattgtttctgggacaccaggccgtgtttttgacatgatc
agaagaaggaacctgagaacccgctctatcaagatgttggttctggatgaggcagatgag
atgctaaacaaaggatttaaagagcaaatttatgatgtctatcgatacctgcctccagcc
acacaggttgtcttgttgagtgccacactacctcatgaaatcttggaaatgacctcaaag
ttcatgacagatccaatcagaatccttgtcaaacgtgatgaattgacactggaaggaatc
aagcagttctttgtcgctgtggagcgtgaagagtggaagtttgacaccctgtgtgacctt
tatgacaccctgactatcacacaagcagtcatcttctgtaataccaaaagaaaggtggat
tggcttacagagaagatgagagaagcaaacttcaccgtggcatccatgcatggcgatatg
ccacagaaggaaagagaagccatcatgaaagacttcagagctgggcaaagtcgtgtttta
atctctactgatgtctgggcaagaggactggatgtccaacaagtctctttggttatcaac
tacgacctgcccaacaatcgtgaattgtacattcatcgcattggtcgatcaggtcgattt
ggccgcaagggagttgctatcaactttgtaaagtcagatgacatccgaatcttgcgtgac
attgagcagtattacagcacccagattgatgagatgcctatgaatgttgctgacctgatc
tag
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