Nematostella vectensis (starlet sea anemone): 5520843
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Entry
5520843 CDS
T01037
Name
(RefSeq) uncharacterized protein LOC5520843 isoform X2
KO
K04988
polycystin 1L2
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
5520843
04091 Lectins [BR:
nve04091
]
5520843
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5520843
Lectins [BR:
nve04091
]
C-Type lectins
Others
5520843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PLAT
F5_F8_type_C
GPS
Polycystin_dom
SEA
Motif
Other DBs
NCBI-GeneID:
5520843
NCBI-ProteinID:
XP_001640553
UniProt:
A7RJ01
LinkDB
All DBs
Position
Unknown
AA seq
1800 aa
AA seq
DB search
MKAPHSLYILVAITFRATLCQDSCNKPLGLEDGRIKDAQFTALTAYDENIKVYGPQRARL
NLSKWPQGYRGNPKSQENSWVSVDFGRGVVITGIATQGYGERGIQEWVSMFMLMYSTQED
DNEKTLAPADRSSEWLFQGNYDASTVVRQSILRPVIASRVKLIPIEWHTNVGLRMELFGC
DADYYMDAWLLYRDTSFRMAYSLPSSNEYQTMANSTEKLLSNYFDVNYVTGYLKTKFMEF
SPQTSTSGLTNLAAKIRFYCLRPSRETLMRELNIFVSAPDSTFENEVTKLRFSKLDCKPP
KINIKPSVDTPKIVGVIRRSFPVFTVSIRQDCPSNDNLLIYWQVATLANSRKVLSPLSPP
QHLNINKFLLLPEMYPTVDTLYIRCVALLQGFQWTFSMDDRFIKLIDADVVAKLQGPSIA
IRGISDIELDASHSYLTTSSEWAKRVILTYSWYCFGPVMDKRIDQADKVKCSPKGERLGI
ATEALHINASDLVEGNYAFQMIVEADGVTSVAVQNVTVYGFQGLSIRCQSNCGRKINSQI
TGILEAECRGSVCSLQRRYLWSAVYTASGKWREVNLTNDPYSSRISLTNLPEILNTSTNI
DKPFIIKVRAFFGDSAQTTSTADFILNSVPDTDYTGEAGCFVNVRQGYAMKTKFQISCER
WQDEDMPLSYKFQYLSEFGNIILQSGYLANASAELLPGNATLDYMVDIECVVVDSLGAST
TVKLPVKVLPPSESEAKSLLKNIKNTLSDLIESGDQDKAADMSLFSLSVMKTRNNSAKEE
AEIKANILDEMADIVVQTLPQVTKFAVLGAETTQQDWPMSNKTKKNALNLITKTANTLKN
LTSEGNMGIDTDLVKNVAEIFIDGVSNVLLSAIPDNEVDISHKCASVSQTIARTFATLKA
VGIGSVSITSKAITINVNRDTPLAFDRVSTRTGGSTLVLPPSVTLFPNTSATPPSIDLQV
IKFVANPFFGDPSQVSVNSEVLDVSLYVESFGELKVKNLQPPINLFIPLKRKHQNESKMQ
SPSHFVKPTLNASNTMNMTFHRIFITSEYVNLTVTLKPEAGSYVDVFVKPAVRPSYDQYV
FKTIIPDLNACLDSKLSPWDAVDGCKRDPFSFDINSKITGAKGLHFIGVRFQPLKGKESS
DTELSGMPNLDESSHDARIVRRNNQIEFSCKSSNGRQKRACVGVKDPPPTPPRPTQVFYP
VYDSTTDVNYTLQIYMASCVYWDHARGTWSSDGCTIGKQSNTSHVHCLCNHLTPFGGDFL
IAPNPIDFDKVLMEFSRLGETGNVLVLVMVCVLWAVYLLGLMVARRADVNDISKELCSTL
INSEDSSSAAYYKITIFTGVWKGCGTTSSVGMTLYGDRDNSRPFYFNNSTKGPTFFSRGS
VTSFIVKCRTLGNIFRVELWHDNSGPSPSWFIDRIEIAEEHSGKYWYFLARRWLAVHKEG
IHVTLPVSDISDLRKFKNIFYSRASKQFCDAHLWLSLFTRTTQSPFTRCQRLACCFLIVF
GSMVVNAMFYQFGKQTDDDFHVGPVRVSLSGIKIGVQSALMLLPVTTLVVIIFKNIKQQR
ITLSLGDPEALEKITVGCLPAGATWIAWLICLSGSAASSVFTVFYSLVWGAEISNQWLIS
TMVSFVEDIFFIQPVKLIILSCLLAWIIKPDLGKEKDSFTSHCVLLRHEEVSLPAARKLK
KCRERKVKRRWLTTTTIEIAAFLFFVSLVFVVCYGRRDSRMFTMTESVKGHFPEFQEVEG
PSSFWKWTSDVLLPALYDKKQNAALDEGFIGNGKLFLVGMPRIRQLRVVSSKLMHYVFDR
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctccacattctctttacatcctggtggcaattactttcagagcaacactttgc
caagactcatgcaacaagcctctcggactcgaagatggacgtataaaagacgcacaattc
acagcccttacagcctatgacgagaacattaaagtctatggcccacagagggctcgtttg
aacctttcaaagtggcctcaaggttaccgcggaaaccccaaatcacaggagaattcttgg
gtatcggtggattttggtcggggcgtggtcatcaccgggatagcgacgcaaggttatggg
gagaggggtattcaagagtgggtgtccatgtttatgttgatgtactcaacacaagaagat
gacaatgagaagactttggcgccagctgatcgcagcagtgaatggctttttcaaggtaat
tatgacgcatcgacagttgttcgtcaaagtattctccgaccagttatagcatcaagagtg
aagttgatcccaattgaatggcacacgaatgttggtctgcgcatggaactgttcggatgt
gatgcagattactacatggacgcatggctgctctaccgtgacacaagttttcgaatggct
tactcccttccaagcagtaacgagtaccaaacgatggcaaacagtaccgaaaaactgctg
agcaattatttcgacgtgaactacgttactggctacctgaagactaaattcatggaattc
agtccacagacgtctacgtctggtctcactaatctcgccgcaaaaataagattctactgc
ctcagaccatcacgtgagaccctgatgcgagagctgaatatatttgtgtctgctcctgac
tcgacatttgaaaacgaggtgaccaagctcagatttagcaagctcgactgcaagccaccc
aaaataaatataaagccctccgtagacacacccaaaattgtgggtgttatcagaagatct
tttcctgtttttacggtaagcatccgacaagactgtccgtccaacgacaatcttctcata
tattggcaagtagccacattggctaactctagaaaggtcttgtcaccattgtcgcctccg
cagcatttaaacatcaacaagtttttattgctgccagaaatgtaccctacggtagacacg
ttatatatacgatgtgtagcgctacttcaaggattccagtggaccttctccatggacgac
agattcataaaactgattgacgcagatgttgtggcaaagctacaggggccttcaatagcg
atacgtgggatatctgacatagagttagacgcatcgcattcttatcttaccacgtcttct
gagtgggcgaaacgtgtgattctaacatattcgtggtattgctttggacctgtgatggat
aagagaatagatcaagctgataaggttaaatgcagtccaaaaggagaacgcttaggaatt
gctactgaggccttacacataaatgcgagtgatcttgttgaaggaaactacgcgtttcag
atgatcgtagaagctgatggggtaacatccgtggcggttcaaaacgtaacagtgtatgga
tttcagggactttcgataaggtgtcaaagcaactgtggtcgtaagatcaattcacaaatc
accgggatattggaagcggagtgtcgtggttctgtctgcagccttcaacgtcgataccta
tggtctgccgtctacacggcttcaggaaaatggcgcgaagtgaacctgactaacgatcct
tacagctcgcgcattagtctcacaaacttaccagagatccttaacacatcaacaaatatt
gataaaccatttattatcaaagttcgcgctttctttggtgatagcgctcaaactacatcc
actgctgacttcatcctcaactctgtgcccgacactgattatacaggagaggctggctgt
ttcgtgaatgtgcggcaaggatacgcaatgaagaccaagtttcaaatatcctgcgaacga
tggcaggacgaggatatgccactatcttacaagttccagtacttgagtgagtttggtaac
attatacttcagtcaggttatttggcaaatgcatccgcagagctattaccgggaaatgct
actttggattacatggtcgacattgagtgcgtagtggtcgactcacttggagcaagcact
acagtaaaattacctgttaaggtactgccaccatctgaatcggaagccaagtccttgctt
aaaaacatcaaaaacacactatccgacctgatcgagtcaggtgaccaagacaaagctgct
gacatgtctttgttttccctctccgtgatgaagacacgaaataactcagcaaaagaggag
gcggagatcaaggcaaacatcctggatgagatggcggacattgtggtacaaacactcccc
caagtgacaaaattcgcagtcctcggagctgaaacaacacaacaagattggcctatgtcc
aataaaacaaagaaaaatgccttaaatctgataacaaagacagcaaacaccttgaagaac
ttgacctctgaaggaaatatgggaattgatacggaccttgtaaaaaatgtggccgaaata
ttcattgacggagtaagcaatgtgctgctttcagcaataccagataatgaggtggatata
tcccacaaatgcgccagcgtttcccagacaatagcaaggacgttcgcaactctgaaagca
gttggcatcggctcagtgagcatcacatccaaagcaataaccatcaatgttaacagagat
acacccttggcttttgatagagtgagtacgcggacgggcggaagtactttggtgctacct
ccatccgtcacattgtttccgaatacatcagcaacccctccatctattgatctgcaggtc
ataaagtttgttgcgaatccattttttggagacccaagccaagtatctgtgaattccgaa
gttcttgacgtcagtttgtatgtggaatcttttggcgagctcaaagttaagaacctgcag
ccaccaattaacctcttcattccgctaaaaagaaaacatcaaaatgaaagtaaaatgcag
agtccttcacacttcgtaaagccaacattgaatgcctcaaatacaatgaacatgacattt
catcggatttttataacttcagagtatgtcaatctgacagtaacattgaagccggaggct
ggaagctacgtagatgtgtttgtaaaaccggccgttcggccgtcatatgaccagtatgtc
ttcaagacaataatcccagatctgaacgcctgcttggactcaaagctttcaccgtgggat
gcagtcgatggttgtaaaagggatccgttctcttttgatataaacagtaaaattacagga
gccaagggtctacacttcattggagttcggttccaacctttgaagggaaaagaaagctct
gacactgagttaagtggaatgccgaacctagatgagagttctcatgacgctaggatcgta
aggaggaacaatcagattgaattttcatgcaagagttctaatggtcgtcaaaagcgcgcg
tgtgtcggtgtaaaagatccaccccccacacctccacggcctacgcaagtattttatcca
gtctacgacagcacgacagacgttaactacactttgcaaatatatatggcatcgtgtgtt
tactgggatcatgcacgggggacctggagcagtgacgggtgtacgattggaaaacagtcc
aacacctcccatgttcactgtctctgcaaccatcttacgccttttggcggcgactttctg
attgcaccaaaccctatcgattttgacaaggttctaatggagttctctcgtctcggagag
actggtaacgtgttagttctcgtgatggtttgcgtgctgtgggctgtttacttacttgga
ctgatggtggcaaggagggcagatgtcaacgatattagcaaagaattatgcagcactctt
ataaattctgaagactcttcgtcggcggcttactacaaaatcactatattcactggagtg
tggaagggctgtgggacgacctcaagtgtaggaatgacactttacggggacagagacaac
agcaggcctttttatttcaacaacagcacaaaaggacccaccttttttagccgtggaagt
gtaacttcatttatcgtcaagtgcaggacacttggaaatattttcagggtggagctgtgg
catgacaattctgggccaagtccatcctggtttatcgaccgaatagaaatcgctgaagaa
cattccggcaaatactggtattttttagcacggagatggctagctgtacataaggagggt
attcatgtgacactccccgtttccgatatcagcgatctgcgcaagttcaaaaacatattt
tattcgcgagcgtcgaaacaattttgcgatgcgcatttatggctatcactatttactaga
acgacacaaagtccattcacgagatgtcagcggcttgcgtgttgctttcttatagttttt
ggatcgatggttgtcaacgccatgttttaccagttcgggaagcaaacggatgatgacttt
catgtcggccctgtccgcgtaagtctcagtggaataaagatcggtgttcaaagtgctcta
atgcttcttcccgtaacgaccttagtggttattatttttaaaaatattaaacaacagaga
ataaccctttctcttggcgacccagaggccctagagaaaataactgtcgggtgcctccca
gcaggggctacctggatcgcgtggctcatctgcttatctggttctgctgcatcctcagtg
tttacggtgttttacagtctcgtatggggggctgaaatctccaaccagtggctaatctca
acaatggtatcattcgtcgaggatatcttcttcattcagccagtaaaactaattatcttg
tcatgccttcttgcttggatcatcaagccagatttgggcaaagaaaaggacagttttact
agtcactgcgtgctgttgcgacacgaagaagtttcattacccgcagcaaggaaacttaag
aaatgccgggaacgaaaagtcaagcgtcggtggctaacgactactactattgaaattgct
gcattcttatttttcgtttcccttgtgtttgtcgtctgttatggtcgtcgcgacagcaga
atgttcacaatgacagaaagtgttaagggacactttccggaatttcaagaggttgagggt
ccgtcgtcgttctggaaatggaccagtgacgtgctgctaccagctctttatgataagaaa
cagaatgctgcccttgatgaggggtttatcggcaatggtaaactcttcttggttggaatg
cctaggataaggcagctgagagtcgtctctagtaagctaatgcattatgtctttgataga
taa
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