Nematostella vectensis (starlet sea anemone): 5520996
Help
Entry
5520996 CDS
T01037
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nve03009
]
5520996
Ribosome biogenesis [BR:
nve03009
]
Eukaryotic type
90S particles
Other 90S particles
5520996
Pre-60S particles
Other pre-60S particles
5520996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
ParcG
TOR1L1_N
TPR_LAA1_C
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
5520996
NCBI-ProteinID:
XP_032221907
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MVRLRKGKGQKWRKGQSCVSNPQTRTHRSNTKRGVITGQKSNTRSNLTMEALARHDEVHE
SDVELGSDEEKSLKSAGMFSISGLTDCTNPAFESIRRFANTQLASQKEVCAVLAAVTEVI
KSQGGSETETEYFAALMTALESAQDQESMTAIAYLLTLIIKRVPESILKTKFSKASQVIL
SSLAAYAGDGGSSLLKSLLGCLCQLLVIQERAVWSESSTVKIYHGLLSFTIHSKPKVRKS
AHEAVHLLLRSPPAGTEFHPAAAVTAKFAIQQIQQHGGSSQAVTTLHIIGLLKEILPCLP
VQNVKSVCENLLKLMTLGNVMVTVNSLQTLFKMFEASPSAASLSPELNAQIINALYDYQP
SANDIDLSQAWITTMEKAHSNLTRLDSKLCVANLARCFSSLMSYFLSDHKVLAHATAATL
KELLHNCLSSALDELMKDLKKPNAGTNTSIHKIIRCLEAGLKYRYQASWGLILQVLNSLF
EVAGEAFPNLMSKVLVSLCDLRGTYQFPHIRELDRAVGMAIQKMGPKNVLTAVPLGLGKE
TDDCNFPRSWLLPILKDNIKDTQLKYFFDEMLPLAADLRAKAVTFTQAGKDLESKVFDTL
QLQIWSLLPGFCTRPTDVVQSFKSVARILGVALTERSDLRLIVCQALRILVSKSEKAEEK
KELAAYAKNYLPILFNLYSADPKNGDPDKLPVLETVRTYLTITDPKLTSRFFTKAIEKVN
SKETSHIARNCMMDLVIAMVPYVNESNLQTLYNMVVPSLKSQDVTQQKKAYRVLEQMCSS
DSQACRAFLSSHLDQLQDKLLNSLASSSSASKAPRLRCLTHIVKHLGAEHKDFITAIIPE
VILCTKEVGTKARAAALSLLVANCHALCRCVPGTRAEGLVAYLELVLAGLAGSPHMVSAT
IISISRLVFEFRGDIPSKVMEQLIESVLVCLKSKTKEVIKSALGFLKVVISVMSREDLAP
YARDLASGIVTWNEDNRRRFRYNVKVLFERLIRKFGYQTALKCVPEDHQKLVHNIHKTTQ
RLKRQKIISRAKNMGADVDDQDTLAPHMESYEALMFGSDDEDDNEAGPKKNVKGKKEVKA
KVQGKGPKTWIREGAEEEPVDFMDANVVQRVVATDPRKGKRKLVNDFETSSDGKLIIPAD
EEDEDDPKPKRKKSDAFADADLMDLEPEVPNSRKKGTRDDEDDDDEDIGPKKKLHQPGAE
YRAKRAGGDVKKKGKPDPYAYLPLNMSTLNRRKQRKVAGQFKGIVRASKKGSLLAQRRNV
KRK
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggttcggttaaggaaaggaaagggccagaaatggcgcaaaggacagagttgcgtatca
aacccacaaacgagaacccaccgatcgaacacaaaacgaggagttatcacgggacaaaaa
tcgaacactcgatcgaacctaacgatggaagcgttggctagacacgacgaagtacacgaa
tcggatgtggagcttggatctgacgaggagaagagtttgaagagtgcaggaatgtttagt
atcagtggattaacagactgtacgaaccctgcttttgaaagcatccgtaggtttgctaac
actcagttggctagccagaaagaggtctgtgcagttttagcagctgtgactgaggttatc
aagtctcagggaggaagtgaaactgagacagaatactttgcagctttgatgactgcactt
gagtcagcacaagaccaggagagtatgacagccattgcatatctactgacattgataata
aaaagggttccagaatctattttgaagacaaagttttccaaggcgtcccaagtcatcctg
tcttctctagctgcttacgctggtgatggtggatcgtcattattaaaatctctcctgggc
tgtctttgtcagcttttggtcatccaggaacgtgctgtttggtcagagtcatcaactgtc
aagatctaccatggtctactcagtttcacaattcattccaagcccaaggttcgtaagtcc
gcacatgaggctgttcatttactattgaggtcccccccagctggcacagagtttcaccct
gcagcagctgtcacggcaaagttcgccatccaacagatacagcagcatggaggatcttcc
caagctgtaactactcttcacatcattggccttttaaaagaaattcttccatgtctccct
gtccagaatgtgaagtcagtctgtgaaaatctcttgaagttgatgacccttggcaatgtg
atggtgactgtcaactccttgcaaactctattcaagatgtttgaagcttccccttctgca
gcaagtttatctcctgaattgaatgcacaaataattaatgcattatacgattaccaacca
agtgccaatgatattgatttgtcacaagcttggataacaacgatggagaaagcacactca
aacttgacaaggctggactccaagctgtgtgttgccaatttggcgagatgtttctcctct
ctaatgtcatacttcctctcggatcacaaagtcctggcgcatgccactgctgctacactt
aaggagctgcttcacaattgtttgagctcagcattggatgagcttatgaaagatttgaag
aaacccaatgcaggcacaaacacctccatccacaagatcatcaggtgtctggaagcaggc
ctaaagtaccggtaccaggcatcttggggccttatcctacaagtcctgaactcgttgttt
gaggtcgcaggagaagcattccccaacctcatgagcaaagtcctggtgtcactttgtgat
ctcagaggaacataccaatttccacacatacgggaacttgatagagctgttggcatggcg
atacagaaaatggggcctaagaatgtgttaactgctgtgcctctagggctgggaaaagaa
acggatgactgcaattttccccgttcctggcttcttccaattttaaaagataacataaaa
gacactcagctgaagtatttttttgatgagatgcttcctcttgcagcagacctaagggcc
aaagctgtcacattcacacaggcaggaaaagacctggaaagcaaagtgtttgatactctc
caactgcagatctggtctttgctgcctgggttttgtacaagaccaactgatgtagtccag
tcattcaagtctgtagcccgtatactcggtgtggctttgactgagagatcagaccttcga
ctcatcgtctgccaggcattaagaatcctcgtcagcaagtcagaaaaggctgaagagaag
aaagaactagcggcctatgccaagaactacctacccattctgtttaacctgtattcagcc
gaccccaagaacggggacccggacaagcttccggtgctggagacggtgcgcacgtactta
accataactgaccccaagctgacatcacggttcttcaccaaagcaatagagaaagtcaac
agcaaagagactagtcacattgccaggaactgcatgatggacttggtaatcgcaatggtg
ccatatgtgaatgagtccaacctccaaacgttatacaacatggtggtgccatcactcaag
tctcaggatgtgacacagcagaagaaagcttaccgtgtgctggaacagatgtgcagctcc
gactcacaggcatgtagggccttcctctcaagccacctcgatcagctacaggacaagctg
ctcaactcactggcatcctcgagctctgcatcaaaagctccacggcttcgctgcctcact
catatcgtgaaacacctcggcgcggagcacaaggacttcatcaccgccatcattccagag
gtcatcctgtgtactaaggaggtcgggacgaaagcgcgtgccgccgctctcagccttctc
gtcgccaactgtcacgcgctttgccgctgtgtccctggtaccagggcagagggtctagtt
gcttacctagagctggtgctggctggcctcgcgggctcaccccacatggtcagcgctacc
atcatttccatttcgcggcttgtgtttgagttcagaggtgacataccgtcaaaggtgatg
gaacagttgatcgagagcgtgctggtttgcctcaagtccaagaccaaagaagtgatcaag
tcggctttaggatttctcaaggtcgtcatctctgtcatgagtcgggaggatttggcgccg
tacgcgcgagacctggcgagtgggatcgtgacgtggaacgaggacaaccgaagacgattc
cgctacaacgtgaaggtcctctttgaacggctcatacgcaaattcggatatcagacggcg
ctaaaatgcgtaccggaggatcatcaaaagctcgttcacaatatccacaagacgactcag
cgcctgaaacgacagaagatcatttcaagagctaaaaacatgggggcagatgtagacgat
caagacacgcttgctccgcacatggaaagttatgaagctttgatgttcggctctgatgac
gaagacgataatgaagctgggccaaagaagaatgttaagggtaagaaggaagtcaaggcg
aaagttcaaggcaaagggccgaagacttggatccgagaaggagccgaggaggaacccgtt
gactttatggacgcgaatgtggtacagcgtgttgtggccacggatccaaggaagggaaag
cgcaagctcgtaaatgacttcgagacatcaagtgacggcaaactcatcatacccgccgac
gaggaggatgaagatgacccgaaaccgaaacgcaaaaagagcgacgcctttgcggatgct
gacctaatggacctcgagcctgaagttcccaattcacgaaagaaaggtactcgggacgat
gaagacgacgacgatgaagatataggccccaaaaagaaactgcaccaaccaggagccgaa
tacagagctaagcgtgccggaggcgatgtcaaaaagaaaggaaagcctgatccatatgcg
tatctgcctcttaacatgtccacattgaacagaagaaaacaacgcaaggtggccggccag
ttcaaggggatcgtccgcgcttccaagaaggggtctcttcttgctcagcggcgaaatgtt
aaacggaaatga
DBGET
integrated database retrieval system
