Nematostella vectensis (starlet sea anemone): 5521090
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Entry
5521090 CDS
T01037
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03018
RNA degradation
nve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5521090
09123 Folding, sorting and degradation
03018 RNA degradation
5521090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5521090
03041 Spliceosome [BR:
nve03041
]
5521090
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
5521090
mRNA degradation factors
5'-3' decay
Lsm complex
5521090
Spliceosome [BR:
nve03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
5521090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
5521090
NCBI-ProteinID:
XP_001640901
UniProt:
A7RIQ2
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MATSLESYVNHTVAVITQDGRMIVGTLKGFDQTVNVILDDSHERVFSSGSGVEQVVLGLY
IIRGDNIAVIGEIDDEVDGSIDLNDIRADPLNAVVY
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgttggagtcatatgtgaatcacactgtagcagtgataacacaagacggc
cgcatgatcgtgggaactctgaagggatttgaccagacagtaaatgtgattttagatgac
agtcatgagcgcgtgttttcctctggaagtggtgtggaacaagttgtactaggattatac
attatcagaggggataatattgctgtgattggtgaaattgatgatgaagtggatggttca
attgatttaaatgacatccgtgcagacccactaaacgctgtagtttattga
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integrated database retrieval system
