Nematostella vectensis (starlet sea anemone): 5521526
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Entry
5521526 CDS
T01037
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04150
mTOR signaling pathway
nve04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
5521526
04150 mTOR signaling pathway
5521526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nve04131
]
5521526
Membrane trafficking [BR:
nve04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
5521526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
SGL
EGF_LRP2
cEGF
Motif
Other DBs
NCBI-GeneID:
5521526
NCBI-ProteinID:
XP_032222612
LinkDB
All DBs
Position
Unknown
AA seq
1665 aa
AA seq
DB search
MFAKVVLCVFCLTLYRISSASSPRLIFANRSDIRILQTNGGTPNVTVVVKNLEDAIALDF
DYEQNYVFWTDVLLEKIKRARIFGNNTQEDVISVGLKRPEGLAVDWCSKKLYWTDSEVET
NRIEVSNMDGRFRKVLFWENLGQPRAIAVDPASGYMFWTDWGEEPKIERAGMDGTQRTVI
VSKDIFWPNGLTIDHNDKRIYWTDAKQHHIATTDFNGKEKRTIIRGTLPHPFAVSLYGNK
LYWTDWTTKSIHSCNKKTGFGRLKLQSNVYSPMGIHVFEKARQDPLPKGRKGCGLNNGGC
SHLCLLSPQGISCACPTGVRLLLDNKTCENGPKHFLLLARRTDLRRISLDTPDHTDVVLP
FVGIKHGIAVDFDPIEEYIYWSDDTLQVIKRAHIDGKGVETVASVEVQNPEGIAVDWIAR
NLYWTDTGMDRIEVSRLNGTSRKILISEDLWEPRAIVVDPGKGHMYWTDWGEHPKIERAD
LDGGNRIILVNSSVTWPNGLTIDYSDNKIYWADAKLDKIEVMDVDGSNRRVVLDSNIRHV
FGLTLLGNYLYWTDWERRNIDSVNKFTGREKRSVVEQLPDLQGLKAINMSITYGSNPCQT
NNGGCSHLCLYRPAGVVCGCPNGMELIKDQLTCIVPRAFLLFSGSHDIHRISLDTYSGGK
DIPLVGIKEANALDFSIEEKRIYWTDITLKSINRAYLNGSNPEKLIIVDLEYPDGLAVDW
IAKNLYWTDSRKHKIEVSRLDGQHRRTLLYKDVWEPRSLTLDPVNGHLYWANGGQDSSID
RANMDGSNRTKVISNVKRPTDITIDYKEGLLFWADSERKVIECADLHGRNRRTVAQATKP
FALTQYLDYIYWTDWETESIERANKTTGLNRTRIRSRVDYVMDITVFHSSRQEGWNVCSM
NNGGCSHLCLARPNKQKTCACPMHFKLMSDNRTCQEPLSFMLYSTVKGIHRFIFDSTDYA
EISLPLRKLHDVKAVSYDISTGFVYWIDAVEGTIRRALENGSLSGVIVAGPDVEPYDLAI
DPYGQQMFWTDAVRNEINVFSLKKMAPLGVVASAKDEMPRSIVLFPEKGLMFWTDVGKNG
PKILRASMDGSFPQPIVSNIPRSPVGLAVDTDRDKLYWTDTAHKKIEFSDLQGAKRTVLV
DTNLLTPIGLAIHGDFVYWIDSRARVLKRVRREVGSDEQTIQAEIDVTDLVALDRSQISG
TVPHPCKQNDCSHICLIGRDNAAKCSCTGSLVLQDDEKNCGGERHHHSNRRISYLEPSTC
KPNYISCASMKAICIPKMWRCDGMLDCTDKSDEEDCPPCKENQFRCDNGQCIDGDPRCDK
YKNCTDGSDELGCATCEPNFFRCNTGKCISARWQCDQLDDCGDNSDEIGCDTPPGNGTNA
NHPPVGLRSPISGNMLGGIVASIVFCIFLFFVTLLVWRRVKRTPHTLSTEIGLVVTPVLH
GHASSLSSSSSSRASICAALPVRNGSTTSGSNKRQKPLPGPTSLSGTSQTPYDRNHLTGA
SSSSSACTVISAYPREPLNPPPSPATERSLFTVRSRGYCESVMTPSTCPSHRYYRTPRMP
PPPTPASTDAEGSVKQPSRHCRRSHRCRPSRGTLSRYNGSVTESTDLAYESDLFAPPPTP
NTNYLSEATHLSDQECPPSPTATERSFFQPYPPPPSPVTETPSLV
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaaagttgttttgtgtgtgttttgtttgactctgtaccggatttcttcggcg
tcgtctccgaggctgattttcgccaatcgaagtgatatacgaattttgcaaacaaatggt
ggaactccgaatgttacggttgttgtaaaaaatctggaggatgcaattgcgttggacttt
gattatgagcaaaactatgtgttttggacggatgttctcttggagaaaatcaaaagagct
cgaatatttgggaataacacacaggaagatgtgatatcggtaggactaaagcgccccgaa
gggcttgcagtggattggtgcagtaaaaaactctattggactgattcggaagtagaaacg
aatcgcattgaagtctccaatatggacggaagatttagaaaagttttattctgggagaat
cttggacaacctcgagcaatcgctgtagaccctgcgtctggatacatgttctggaccgac
tggggagaagagcctaaaattgagcgtgcaggaatggacggcacacaaagaactgttatt
gtatcgaaagatattttttggcctaatggcttaacaatagatcacaatgataaacgaatc
tattggactgatgctaagcaacatcacattgcaactacagacttcaatggcaaagaaaag
agaacaattatacggggaacattaccccatccatttgcagtcagtttgtacggaaataaa
ctctactggactgattggacaacaaagtccattcattcatgcaacaaaaagacaggtttt
gggagactcaaattgcagtcaaatgtgtactcgccgatggggatccatgtatttgagaaa
gcaagacaggatccattaccaaaaggacgtaaaggctgtggcttgaataatggaggttgc
agccatctttgcttgctctccccccaaggcatctcctgcgcatgtccaactggtgttagg
cttctactggacaacaaaacctgcgaaaatgggcccaaacatttccttctgcttgcaaga
cggacagatctacggaggatctcactagacacccctgaccacactgatgtagttctaccc
tttgtggggatcaagcatggaatagctgtcgactttgaccctattgaggagtatatatac
tggagtgatgacaccctacaagtcatcaagagagcccatattgatgggaaaggtgttgag
acagtggcatcagttgaagttcagaatcctgaaggcatcgctgttgactggatagctcgt
aacctgtactggacagatactggaatggacaggatagaagtcagcagacttaatggcact
tcccgcaagattcttatctcagaggacctgtgggaaccaagggctattgttgtcgaccca
ggaaaggggcacatgtactggactgactggggagaacacccaaagattgagcgagctgat
cttgatggtggtaacagaattatcttagtaaacagctctgtgacatggcctaatggctta
actattgactattccgacaacaagatatactgggcagatgccaagcttgacaaaatcgaa
gtcatggatgtagatggaagcaatcgtagggtggttcttgacagcaatatacggcatgtt
tttgggttgactcttcttggaaactacctctattggacagactgggagcgcaggaacata
gacagtgttaataagtttacaggaagagagaaaagaagtgttgtggaacaactgccggat
cttcaaggactcaaggccatcaacatgtccatcacttatgggtctaacccttgtcagaca
aataatggtggctgtagtcacttgtgtctgtatcgtcctgcgggtgttgtgtgtggatgt
ccaaatggaatggaactgatcaaagatcagctcacttgtattgtgccaagagcatttctt
ctgttctctggaagccatgatatccatcgaatctccttggatacctacagtggtggcaag
gatattcccctggttggcatcaaagaagccaatgcgttggatttcagcattgaagagaaa
agaatttactggactgatataaccctaaagtcaatcaaccgagcatatctaaatggaagc
aacccagagaaactaattattgttgatctggaatatccggatggacttgctgtggactgg
attgctaagaatttgtactggacagattccaggaagcataagattgaggtgtccaggctt
gatggtcaacataggcgcactcttctttacaaagatgtgtgggaaccaagatctcttact
ttggatcctgtcaatggtcacctatattgggccaatggcggacaagactcaagtatagac
agagcaaacatggatggttccaaccgcaccaaggtcatctctaatgtcaagcgccccacg
gacatcacaatagattacaaagaagggttgctgttctgggctgactctgagaggaaagtg
atcgagtgtgctgacttgcatggcagaaacagaagaactgttgcccaagcaacaaaacct
tttgcactgactcagtacttggactatatttactggactgactgggagaccgagtctatt
gagagagccaacaagaccactggtttaaacaggacacgtatacgcagtcgggtggactat
gtcatggatattaccgtgttccactctagccgccaagagggttggaatgtttgctccatg
aataacggcggatgcagtcacttgtgtttggcacgccctaataaacagaaaacctgtgct
tgccctatgcacttcaaactgatgtctgataatcgcacgtgtcaagagcccctctcattc
atgctgtacagcaccgtgaagggcatccatcgcttcatattcgactccactgattacgcc
gagatcagccttccactgcgcaaactccatgatgttaaggctgtgagctatgacatcagc
actggctttgtgtactggattgacgctgtggaaggcaccatccggcgagctcttgagaac
ggctctcttagtggagttatagtcgctgggccggacgtggaaccatatgacctagccatt
gacccgtatggccagcagatgttctggactgatgctgtccgaaatgagataaatgttttc
agcttgaaaaagatggcgcctttaggcgtggtagcatcagcaaaggatgagatgccacga
tccattgtactatttcccgagaaaggtttaatgttctggacggatgtcggtaagaacggt
cccaagatccttcgcgcatccatggatggctcgttccctcagccaatcgtgagcaacata
cccaggtccccagtcggcctcgccgtggacacggacagggacaagctgtactggacggac
actgcacacaagaagatcgagttttccgacctgcaaggtgctaagcgcacggttctcgta
gacacgaacctcctcacccccatcggccttgccattcatggggacttcgtctactggatt
gacagccgcgcgcgggtactcaaacgagttcgcagggaagtgggaagcgacgagcagacg
attcaagccgaaatagacgtcacggacctcgtagctcttgatcggtcccagatcagcggg
acagttccacacccgtgcaagcagaatgactgtagtcacatttgcctaattggacgggat
aatgccgccaagtgctcctgtacgggctcgctagtattgcaggatgacgagaagaactgc
ggaggtgagagacatcaccatagtaacaggcgaatatcatacttggagccttccacttgt
aagcccaactacatctcatgcgccagtatgaaagccatctgtatcccaaagatgtggcgc
tgcgacggcatgcttgactgtacggacaaatccgacgaggaagattgccctccttgtaag
gaaaaccagtttcgttgtgataatggccagtgtatagacggtgacccacgctgtgataag
tacaagaactgcactgacggcagtgacgagctaggatgtgccacttgtgagcccaatttc
ttccgctgcaacaccggcaagtgtatcagcgctcgctggcagtgtgaccaattggatgac
tgcggagataactcggacgagatcggctgcgacactcccccgggtaacggcactaatgct
aaccacccgcccgtgggccttcgatcgccgatcagcggcaacatgcttggaggaatcgtc
gcatctattgtgttctgtatttttctattcttcgtcacgttgctggtctggcgtcgtgtc
aaacgcacccctcacacgctcagcacagagatcggcctcgttgtcacgccagtgttacat
ggtcacgcatcctctctttcgtcctcaagctcatcacgcgccagtatttgtgcggcgtta
ccagtacggaatggatctaccacttccggttcgaacaaacggcaaaagccacttccggga
cctacttcactgtctgggacttcgcagacgccttacgatcgcaatcatctgactggcgcg
tcgtcatcttcatctgcgtgcactgtcataagcgcctacccacgagagcctctaaacccc
ccaccctcccctgcaacggaacgctcgttattcacggtacggtcacgtggctattgtgag
tcggtgatgacgccttccacgtgcccatctcatcgttactatagaacgccgcggatgcct
cctcccccaacaccggcatcaacggacgcggagggctccgtcaaacagcccagtagacat
tgccggcggtcacataggtgccggcctagtagggggacactcagtcggtacaatggctct
gtcacggagtcgaccgacctggcttacgagtcggacttattcgctccgccgccaactcca
aacactaactatttatccgaggcgacgcacttatctgatcaagagtgtccgccctcaccc
accgcgaccgagcggagcttctttcagccgtacccccctcccccatcaccggtgacggaa
accccctcgctcgtgtga
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integrated database retrieval system
