Nematostella vectensis (starlet sea anemone): 5521539
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Entry
5521539 CDS
T01037
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5521539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5521539
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
5521539
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
5521539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
TRAM
Motif
Other DBs
NCBI-GeneID:
5521539
NCBI-ProteinID:
XP_001641337
UniProt:
A7RH11
LinkDB
All DBs
Position
Unknown
AA seq
188 aa
AA seq
DB search
MEASIAVPGERLGSAEQYSAGNGTYSRHGHIYSCLAGYRHVEKDGDKSVMSIVREEEKDV
VPKIGSIVTCKVTSVNPRFCKAAILGVESTALKETFRGMIRKEDVRATEKDRVEIYKCFR
PGDIVVARVTSLGDAHSYLLSTAENELGVVFAKSEAGATMVPISWCEMQCPKTMAKEQRK
VAKVLKQS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctcaatagctgtcccgggcgagcgacttggcagcgctgaacagtattcggcg
ggtaacgggacatacagtcgccacggccatatctactcgtgcctcgccgggtacagacac
gtggagaaagatggggataaatctgtgatgagcatagtcagagaagaagaaaaagatgtg
gtccccaagattggatcaattgttacttgcaaggttaccagtgtgaatccacgtttctgc
aaagcagccatactgggagtagagtccacagctctcaaggaaacatttaggggaatgatt
aggaaggaagatgtcagggcaactgaaaaagacagagtggaaatctacaaatgtttccgc
cctggtgatattgttgttgccagggtcacttcactaggagatgcgcattcttaccttcta
tcgactgctgaaaatgagttgggggtagtatttgctaaaagtgaagcaggggccactatg
gtaccaataagctggtgcgagatgcaatgtcctaaaaccatggctaaagaacagagaaaa
gtagccaaagtactgaaacaaagttag
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