Nematostella vectensis (starlet sea anemone): 5521736
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Entry
5521736 CDS
T01037
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5521736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nve03041
]
5521736
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
5521736
Spliceosome [BR:
nve03041
]
Complex C
Other components
Step II factors
5521736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
DEAD
HA2_N
GIPC1_GH2
AAA_22
AAA_19
nSTAND3
PhoH
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
5521736
NCBI-ProteinID:
XP_032222774
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MEELKQLEQLSLVSKICTELDNHLGINDKDLAEFIIALAEKNSTLDSFKSALAENGAEFP
DSFTSNLLRLIQKMKPSEVVPAGPSKDNTTDETIDPDLYAKKKKFPGLSIPDKEFEPVVK
NTVEDEKVAASALDELEALIPKTEKASKTDRRKEHRRNRSRSRERESKRDHRSRQRSRSR
SESPARESRRDRDRHREGDRHRHIERDDDRERSRDRYSDKEDKSRRRRDQEGGRHGSSRV
EQAPPSAPVVNQVYTGKVTSLMQFGCFVQLEGLKGRHEGLVHISQLRREGRVANVSDVVH
RGQRVRVKVLSMAGNRISLSMKDVDQDTGEDLNPTRSRQPIGGELNDMARNPDRPAGIPV
VPVYDEDDAKLKRKVQRITSPEKWELKQLIAAGVLDKSDYPDFDEDTGILPKEDDGSDED
VEIEMADEEPEFLRGQTKLSINMSPVKIIKNPDGSLQRAAMTQSALAKERRELKQAQREA
QADSIPKDLGKLWVDPVPDADGDKPYFAQDMRGMNLASQDMPEWKKASFGGNKASYGKRT
NLTIIQQREGLPIFKLRDELVKAVHQNQVLIVIGETGSGKTTQITQYLAEQGFLTQGKLA
CTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSPETKIKYMTDGFLLRECLIDP
ELKQYSVIMLDEAHERVIHTDVLFGLMKKAVQRRPDLKLIVTSATLDAVKFSTFFFEAPI
FTIPGRTFPVEILYTKEAESDYLDAALITVMQIHLTEPPGDILVFLTGQEEIDTACEILY
ERTKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKCVIATNIAETSLTIDGIYYV
VDPGFVKQNVYNSKSGMDALVVTPISQAQAKQRSGRAGRTGPGKCYRLYTERAYRDEMLA
TAVPEIQRTNLASTILSLKAMGINDLLSFDFMDPPPMETMISAMEALHSLSALDNEGLLT
RLGRRMAEFPLEPQLSKMLIQSVHLGCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAK
FHQPEGDHLTLLAVYNSWKNNKFSNAWCFENFVQARSLRRAQDIRKQMLGLMDRHKLDVV
SCGKHTARVQKAITSGFFRNAARKDPQEGYRTVVDNQVVYIHPSSALFNRQPEWVVYHEL
VLTTKEYMREVTTIDPKWLVEFAPSFFRVADPTKLSKRKRHERLEPLYNRYEEPNAWRIS
RAFRRR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactaaaacaactcgagcaactttccctcgtgtcaaagatatgtacggagctc
gacaatcatcttggcatcaatgacaaagatcttgctgaattcattattgcgcttgctgaa
aaaaactcaaccctagacagctttaaatctgcactagctgaaaatggggcagaatttcca
gattccttcacctcaaacttgttacgtctgatacaaaaaatgaagccaagtgaagttgtc
cctgcaggaccttcaaaagacaatacaacagatgaaaccattgatccagatctgtatgca
aaaaagaagaaattccctggactgtctataccagataaagagtttgaaccagtagtgaag
aatactgtggaagatgagaaagttgccgcctcagcattagatgagttagaggctttaatt
ccaaagacagaaaaggcttccaagactgacagaagaaaagagcatagaagaaacaggagt
agaagtagggaaagggaatctaaaagagatcacaggtcaagacaaagatctagatcaagg
tcagaaagtcctgcccgtgagagcaggagagaccgtgatagacacagagagggagacaga
cacagacacatagaaagagatgatgacagagaaagatccagagacagatactctgacaaa
gaagacaagtcaagaagaagaagagatcaagaaggtggcagacatggatcaagcagggta
gaacaggcaccgcccagtgcaccagttgtcaatcaggtgtatactgggaaagtcacaagt
ctcatgcagtttggctgttttgtccagctagaaggtctcaagggaagacatgagggtctc
gtacatatatcccagcttcgtagggaaggtcgtgtggccaatgtgtcagatgttgtgcac
agaggacaaagagtcagggttaaggtgctttccatggcagggaatcgaataagcttaagc
atgaaggatgtcgaccaagacacaggggaagacttgaatcctacccggagtaggcagcca
attggtggagagctgaatgacatggcaagaaaccctgatagacctgctggtattcctgtg
gtacctgtttatgatgaagatgacgctaagctcaagcgtaaggtgcagcgtatcacctct
cccgagaagtgggagctgaagcagctgattgcagcaggtgttctggacaagtctgattac
ccagactttgatgaggacactggaattttacctaaagaagatgatggttcagatgaagat
gttgagattgaaatggcagatgaggagccagaattcctgcgaggtcagaccaagcttagc
ataaacatgagtcctgtcaaaattattaagaacccagatggctcactacagcgtgccgca
atgactcagagtgcattggccaaggaaaggagggagctgaagcaggcccagcgtgaagcg
caggcagacagcatccctaaagacctcggcaagctctgggtggatccggttcctgatgct
gatggtgacaagccatattttgcgcaggacatgcgtggtatgaacctggcctcgcaagac
atgccagagtggaagaaagcaagtttcggtggaaacaaggcatcttacggcaagcgaacg
aacctcaccattatacagcagcgagaaggactacccatctttaagctcagagatgagctc
gtcaaggccgttcaccaaaaccaggttctaatcgtgatcggtgagactggcagcggcaag
accacccagatcacccagtacctagcagagcaaggtttcctcacccaaggaaaactagcg
tgcacccaaccgcgtcgcgttgcagcaatgtccgtggccaagcgtgtgtcagaagagttc
ggctgtcgtctaggccaggaggttggctacaccattcgattcgaggattgcacgagtcct
gagacaaaaattaagtacatgactgacgggttcctgctgagagaatgtctgattgatccg
gaacttaagcaatactctgtcattatgctggatgaagcccacgagcgtgtcattcacacg
gatgtcttgtttggcttgatgaaaaaggcggttcagagaaggcctgacttgaagctcatc
gttacctccgctactctcgatgctgtcaagttttctaccttctttttcgaggcccctatc
ttcactatccccggtcgtacatttccggtggaaattctttacacaaaggaggctgaatcc
gactacctagacgcagctctcataaccgtcatgcaaatccacttgaccgagccacctggt
gacatcctggtgtttctcacaggtcaagaagagattgacacagcatgtgaaattctgtac
gaacgcaccaaatctctgggtccggatgtgcccgagctcatcatcctcccagtgtacagc
gccctccccagcgagatgcagacaaggatctttgaccccgcccctcccggcagtaggaag
tgcgtcattgccacgaatatcgccgagacgtcgctcactatcgatggcatctactacgtg
gtagatcctggcttcgtgaagcagaacgtgtataactccaagtcaggcatggacgccctt
gttgtcacacccatctcgcaggcccaggctaaacagcgatcgggtagagctggccggacg
gggcctggaaagtgctaccgtttgtacacagagcgcgcgtatagagatgagatgttggcc
accgctgtcccggagatccagcgtactaacttggcgagtactatactttcgctcaaagcg
atgggaatcaacgatctgctgtccttcgactttatggatccgccgccaatggagacgatg
atctcagccatggaagctcttcactcgcttagcgcactcgacaatgaaggcctgctgaca
cggctcggtcgccgtatggcggagttccctctcgagcctcagctttctaagatgttgatt
cagtcggttcatttgggctgcagtgacgagattctaactatcgtctccatgctgtcggtg
cagaatgtcttttatcggccaaaggacaaacaagctttagcggaccaaaagaaagccaag
ttccaccagcccgagggagaccacctgaccttgctagcggtctataattcgtggaaaaac
aacaagttctcgaatgcctggtgcttcgagaactttgtgcaagcgagatctcttaggcga
gcgcaggacatccgcaaacagatgcttggactaatggatagacataagctggacgtggtg
tcgtgtggcaagcacaccgcgagggtacagaaggccatcaccagtggcttctttcgtaac
gcggcgaggaaggacccccaggaaggctaccggaccgtggtggataaccaagttgtgtat
atacacccttcaagcgcgcttttcaatcgtcagcccgaatgggtggtctaccacgaactt
gtcttgactacgaaggagtacatgcgagaggtcacaacaattgacccaaagtggctggta
gaattcgccccgtcctttttcagggttgcagatcccactaaactcagcaagaggaaacga
cacgagaggcttgagccactctacaacagatacgaggagccaaacgcctggcgtatctca
cgcgctttcaggagaagataa
DBGET
integrated database retrieval system
