Nematostella vectensis (starlet sea anemone): 5521930
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Entry
5521930 CDS
T01037
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nve03036
]
5521930
03400 DNA repair and recombination proteins [BR:
nve03400
]
5521930
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
5521930
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
5521930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_2
Cnd1
Motif
Other DBs
NCBI-GeneID:
5521930
NCBI-ProteinID:
XP_032223024
LinkDB
All DBs
Position
Unknown
AA seq
1677 aa
AA seq
DB search
MPRVEPNAGSKRKKRESGTTRLNEKLGSDELLQQLKALAEELSEAEQSSAKQYGDTAEFL
ARHYVLKHKDKGVRLYAACCLVDILRIYAPEAPFNQDQMWEVFSLIISQLRGLEHGPNGL
NIKKHFYILESIALVRSFTVCLELDFQDLILQLFKLFFSVVKESHSVKVLNLMVEVMSPI
IEDSESIPQELLDTVLINLIEPIKSQNPSAYRIASNLVEKTSSSIEPFIQMFFNSVLTLG
KTSESDLTDRVYDLILELNRIAPLVLLSVLPQLEFKLKSPDVEDRLAVTRLLSQMFSDQS
SELAIQNKSLWQSYLGRYLDINVDVRVECVKNAKHFLILNNELSSEVSEKLRSRSKDPDD
KVRQEVVTGTCEAASQNIDCVSDKLFEDICERMRDKKSNVRMEAMICIGKLYKKYTTGAT
ADLSAAKRLSWVPNKLLVWYYQPSIEDQLCVERLLSGCLVPVSLPAEERVKRLLSLYTRL
DEHAVGALRMVFKCQANVRSDLAALVQLVGEEKSNDTDKMIMSHIITLARTLPNPFKSQE
NLKKLPEMLKEEKTRALLSTCVNPNVGCPAVFKAVSEFVVKLGARNPILDTMKAMLDRAA
PVLVDAECIRILLTQVKNLIEGLEHDEEEEEDLDESTDSPSNRGTKGLDLLVTLSSVFPS
HFQNEESFELLLVFLKHHDPQLVSLALQILSNTVEEMQSTAESLISYYQPVLSNLATKGT
PRHAKFAIRSLAKIFKDPINVFERIFSNIVSSLDYDHPMLLTYLTSLAELAVLVPSLFET
KQKFIIRDFVVKELLVKDRQTQEEAEEKGDKDWCDDLDLSILMQSKIKGIKVMVRWLEGL
QSNHKNSGLPVLRLLHTVLVHAGDLQNNNCVCPHDCSRLRLAAACGMLKIAKELNYEEVV
SLEHYQQLALTIQDPCFEVRAKFIKKLHKSLDTLKLPLDYLAIFCLAATESNKDKKTQVR
QMIARNINIRKEYLKIHSVAQACSHAILPEYALPCVIHLLAHHPDFDAKSKDSLVEFKEY
LWFFMEPIIAANTGNAGLIKKLLENIKQTEDVQCPENATANEAIYALCDLAYGLVLNKAT
GLVSEEFPLNPLLPKKMFQPSKRATPNNKSYLPKGFMFFAGKKKAAVPEASKPASRASKA
STKRRNLNDTKVAVKASRGRQLETKNKNTTFSSPGEDTPESGLGSPAKPSPRKRLRSAAS
PAKKPPAKSRKTATDSDSQSDSEEEVLPTKASRSRGRQQPGAKATTAKSSTRSPRKEDAS
HDQQSESDGEESLEKDSNRGKQLSSPKKKVAVKSPRKATTNADSGSDSEEAASKTKTSRD
RSKLQASPTKKATKKAFSRGARKTVTTADSASEPEEEVSPKKGAIGRAKQQTSPTKKSTT
RSPRKTSEDVEMEVTSSRASSRARRKPETSPTKPPSARSTSRGSAPSQRKNKKDNGMEEV
ESPVVSPIKRTAERGGGSPAKRLRESATVAATSTPASPLRRGRSAKVSEAISPVRGSVVP
TKGKTQAQSPSRGKRVTSKSVNASRSPRIETGKSEGQRLSPRRKTTTASLTKTIRSPFKS
GTSELAQKSPIAGRAVRKIQSELDSLPEDEESTSNTTPTSSRSPTKTRPELNGVSDSPGK
NRTSPRKSATEASPSKKRKIEEPAKVAKKSKTENKPSPKKTAPPVLNVRRRNTRARR
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgttgaaccaaacgctggctcaaaaagaaagaagcgagaaagcggcaccaca
aggctgaatgaaaaactcggcagtgatgaattactacaacaacttaaggctctagctgag
gagctatcagaagctgagcagtcaagcgccaagcagtatggcgacaccgctgagttcctg
gcccgacactatgtcttgaaacacaaggataagggagtgagattatatgctgcatgttgt
ctggtggatatattaaggatttatgctccagaggcaccatttaaccaagaccagatgtgg
gaagtcttctccctcatcatcagtcagctaagaggactggaacatggcccaaatggactc
aatatcaagaaacatttttatatcttggagagtattgctctggtgaggtcattcaccgtt
tgtctggagctcgattttcaggacctgatactgcagctttttaaactcttttttagtgtt
gtgaaggaaagtcactcagtcaaagtactgaacctgatggtggaggtcatgagtccaata
atagaagacagtgaatcaataccacaggaactcttggatacagtactgataaatctcatt
gagccaataaagagccaaaaccctagtgcatatcggattgcatccaaccttgtagagaaa
acatcttctagcatagagcccttcattcagatgtttttcaacagtgtcctgactcttggc
aagacatcggaaagtgacctcacagatagggtgtatgaccttattttggaactgaaccga
atagctcctttagtgctgctttctgttctgccacagctagagtttaaacttaagagccct
gatgttgaagacaggcttgctgttacccggttactctcacagatgttctctgaccagagc
tctgagctagctattcagaataagtccctatggcagtcatatcttgggagatatttggac
atcaacgttgatgtcagggttgagtgtgtgaaaaatgcaaagcactttctaatcttaaac
aatgagctgtcatcagaagtttcagaaaaattgagaagtcggtccaaagaccctgatgat
aaagtcaggcaagaggtagtgacaggaacttgtgaagcagcatctcagaacattgactgt
gtgtcagacaagttatttgaagatatctgtgagaggatgagggacaagaagtcaaatgtg
aggatggaagcaatgatttgcataggaaagctttacaagaagtacacaacaggagccaca
gcagatctctcagctgccaagaggttgtcctgggtgccaaacaagcttctagtgtggtac
taccaaccatctattgaagaccagctttgtgttgaacggctgctgtctggttgtcttgtg
cctgtctcgctgccagcagaagaacgagtgaagcgattactgtccctttatactcgtttg
gatgaacacgctgttggtgcccttagaatggttttcaaatgccaagcaaatgtgcgttca
gatctcgcagctcttgtacagcttgtaggagaggagaagagtaatgacacagacaagatg
attatgtcacacatcatcacattggcaagaactcttcctaatcccttcaagtcccaagaa
aatctaaaaaagctacctgagatgctgaaagaggaaaaaacaagagctctgctgagtact
tgtgtaaaccctaatgtgggatgtcctgcagtttttaaagctgtgagtgaatttgttgtc
aagttgggagcaaggaaccctattctagataccatgaaagccatgttggacagagccgca
cctgttcttgtcgacgcagaatgtatcaggattctcctgacacaagtcaagaatttgatt
gaagggctagaacatgatgaagaagaggaggaggatcttgatgagtcgacagactcgccc
agtaataggggcaccaaggggctggacctgctagtgaccttatccagtgtcttcccatca
cattttcaaaatgaggagagcttcgagctgcttcttgtttttctaaaacaccatgaccca
cagctagtgagcttagcgttacaaatcctctcgaatactgttgaagagatgcagtcaact
gccgaatcgctgataagctattaccaacctgtcttgtctaaccttgcgaccaaaggaact
cctcgtcatgccaaatttgctattcgctcattggcaaaaatattcaaggatccaatcaat
gtctttgagcgcatcttttctaatattgtgagttcgctggactatgatcaccctatgcta
ttaacatacctcacttccctggccgaactcgccgtattggttccctcactgtttgagaca
aagcagaagtttattattcgagattttgtggtgaaagagctgcttgtgaaagaccggcaa
acacaggaagaggctgaggagaaaggtgacaaagattggtgtgatgatttagatttgagt
attttgatgcaatcaaaaataaaaggaatcaaagttatggtccgctggttagaaggcttg
cagtccaaccataagaactctggattgcctgtgttaaggcttttgcatacagtgctagta
catgcaggagatctacaaaataataactgtgtctgcccacatgactgttctaggcttcgt
ctagctgctgcctgcggaatgttaaaaattgcgaaggagctgaactatgaggaagttgtt
agtttggagcactaccaacagcttgccctcacaattcaggatccttgttttgaagtgcga
gctaagttcattaagaagctgcacaagtcgcttgacacactcaagcttccactggactac
cttgctatcttctgccttgctgccactgaatccaataaagacaagaagacgcaggtacgt
cagatgattgctcgtaatatcaacatcaggaaggaatacctgaaaatccactccgtggcc
caagcatgctctcatgctatcctccccgagtacgcgctgccgtgtgtgatccatctctta
gctcaccatccagactttgatgcaaaaagtaaagactcattagtggaattcaaagaatat
ctttggttctttatggagcccatcatagcagcaaacactgggaatgcagggctgatcaag
aaactcttggaaaacatcaaacagaccgaagacgtgcagtgtcccgagaatgcgacagcc
aatgaggcaatctacgcgttatgtgatctcgcctatggccttgtactgaataaggcaaca
ggtttggtatctgaggagttcccactaaaccctctgttgccaaagaagatgtttcagcca
tcgaaaagggcaacaccaaacaacaaatcatatctaccgaagggattcatgttctttgct
ggaaagaaaaaggcggctgtaccagaagcaagcaaacctgctagtagggcatccaaggcg
agcacaaagagaaggaatctaaacgacactaaagtagcagtaaaggcgtcacgtggaagg
cagctcgagacaaagaataaaaacacgaccttctcgagtccgggggaggatacaccggag
agcggacttggaagtccagcaaaaccctcaccaagaaagcggttgaggtcagcggcatct
ccggcaaagaagccacctgctaaatctcgcaagactgctacagactcggacagccaaagt
gactcagaagaagaagtcctgccgacgaaagcctcaagaagtaggggtagacagcagcca
ggagctaaagcaacaactgccaagtctagtacaaggtctccaagaaaggaagatgccagc
catgatcaacagagcgagtctgatggcgaagaatccctagagaaggactcaaatcgaggc
aagcaactgagttcgccgaaaaagaaagtggcagttaaatctccacgtaaggctactaca
aatgctgactcggggagtgattcagaagaagcggctagcaaaacgaagacttccagggac
cgttccaaactacaagcatctcctacaaagaaggcaacaaagaaagcgttctcaaggggc
gctcgcaagactgtgacgaccgctgactctgcaagcgaaccggaagaagaggtaagcccg
aagaaaggcgccataggcagagctaaacaacagacttctccgacaaagaaatccaccacg
agatcgcctcggaagacttccgaggatgtagagatggaagtaaccagttccagggcgagc
tcaagggcgcggaggaaaccagagacttctcctacaaagccaccatcagcccggtctact
agtagaggcagtgctccatctcagagaaaaaacaagaaagacaacggaatggaagaagtt
gagtcccctgtggtttcaccaatcaagagaacggcagaaagagggggaggatctccagca
aaaaggctacgagaatccgcaaccgtagcagcaacatccactcccgcatcacctctgaga
cgggggcggtctgctaaggtgtctgaggcgatctcgcctgttcgcggctctgtcgtacct
acgaaaggaaagacacaggcacagagcccatctcgcggcaaaagagttactagtaagtct
gtaaacgcatcgaggtcgccacgtattgaaactggaaaatcagaaggtcagagattgtct
cctagaaggaagacgacgactgcatcactgacgaagacgatcagatcacctttcaagtca
gggacgtccgagctcgcgcaaaagagtcccattgctggtcgagcggtgcgaaaaatacag
tcagagcttgactctttgcccgaggatgaagaaagcacttcaaacaccacaccaacctcc
tccaggagtcccaccaagacaagacctgaacttaatggcgtttcggattctcccggaaag
aaccgcacctcacctagaaagagtgcaacggaagcaagtccttcaaagaaacgtaaaata
gaagaaccagcaaaggttgctaaaaagtctaaaacagagaataaaccaagcccaaagaag
accgcacctccagtgctaaacgtacgacgacggaacactagagcacgcagataa
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integrated database retrieval system
