Neodiprion virginianus: 124296804
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Entry
124296804 CDS
T09046
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg04137
Mitophagy - animal
nvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124296804
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124296804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvg04121
]
124296804
Enzymes [BR:
nvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
124296804
Ubiquitin system [BR:
nvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124296804
Multi subunit type E3
ERAD complex
124296804
LMBR1L-GP78-UBAC2 complex
124296804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-rbx1
CUE
zf-RING_5
zf-RING_16
zf-ANAPC11
G2BR
Prok-RING_4
zf_RING_Vps8
zf-C3HC4_4
RING_XB3-XBAT31
DUF6924
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
124296804
NCBI-ProteinID:
XP_046603141
LinkDB
All DBs
Position
1:complement(38427847..38451264)
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AA seq
616 aa
AA seq
DB search
MPMVFLDRLPVPSLRAYTSISIAILSCSIYYAAQIVKDPGWRNNHPNSLVAAVGNATDNN
ASAIVDSRTLGVHVRELFACMVQEPGCIWTLINMAYCVLILVGKSIQKLVFGELRVSERQ
HLKDKFWNFVFYKFIFVFGVLNVQYMDEVVLWCAWFTALGFLSLLSQLSKDRFEYLSFSP
TTPGWSHVRLLGLLTAILALSSFMLLMCVAAGFFFVSFNTFAFMAAECILLGVRTIHVML
RYAIHLYDTRGAGNTSPRSWDKRGPLAYYTELTSELTILAVDFLHHVHMLLWSNIFLSMA
SLVICMQLRYLFHEIQRRITKHRNYLAVLSHMEQNYPMASQEELAENSDNCAICWEKMET
ARKLPCGHLFHNSCLQSWLEQDTSCPTCRLALSMQANHRENAPEIPSESPTPARRNDNHF
FHFDGSRYVSWLPSFSVEVTHNRIRGDISALAHTNSQLDAMARQVQQLFPYYPRNVILED
LRGTRSIEITIENILDSRLLPPHHVIEEPEAEPATTTQTTTAHILPIPLVQDTLDPRLDI
PAADSGEEPSNLGGRFSKSSMERERILQRRKEHMLLTARRKYFERHPHHNESDTSLDVSS
PVNLNNVTPRISLSHN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggtttttctcgaccgcttgccggtcccgagcttacgcgcttacacctcgata
agcatcgcgatattgtcatgttcgatttactacgctgcacaaatcgtcaaggatccagga
tggcggaacaatcatccgaactccttggtcgccgctgtgggaaacgccaccgacaacaat
gcatcggccattgtcgattccaggaccctcggtgttcacgtgagggaactttttgcctgc
atggttcaggagccgggatgcatatggacgctgataaacatggcgtactgcgtattgata
ctcgtcggtaaatctatccagaaattggttttcggcgagcttcgagtttccgaacgacag
caccttaaggataaattttggaacttcgttttctacaagttcatattcgtcttcggtgta
ctcaacgtccagtacatggacgaggtcgtgctttggtgcgcctggtttacggctcttgga
tttttgagcctgctgagtcagttgtccaaggatcgtttcgaatatctctccttctcgccg
acgactcccggctggagtcacgtccgacttttgggcctccttaccgccatcctggctctt
tcgtcattcatgttgttgatgtgcgtcgcggctggttttttcttcgtatctttcaacacg
tttgctttcatggcagccgagtgcattctattgggagtgagaacgatccacgttatgcta
cgctatgcgatacatctgtacgacacccgaggagctggtaacacatcgccacgttcctgg
gataagcgaggtccgctagcctattacacagaattaacttcggaacttaccatactggcc
gtagacttccttcaccacgttcacatgctgctttggagtaatatattcctgagcatggct
tctcttgttatttgtatgcagctcagatatctattccacgaaattcaacggcgtataaca
aagcatagaaattatcttgctgtgcttagtcacatggaacaaaactatccgatggcgtcg
caagaggaactagcagagaattccgacaactgtgctatttgctgggagaaaatggaaact
gctcggaaactgccttgcggacatttgtttcacaactcgtgtctgcagtcttggttagag
caggacacttcttgtcccacgtgcagattggccctgagtatgcaggccaatcacagggaa
aacgctcctgaaataccctccgagtcccccacacctgcacgtcgtaacgataatcacttc
ttccacttcgacggatccagatacgtctcctggctgcccagcttctccgtcgaggtcacc
cacaacaggatcagaggcgatatttctgccttggcgcacaccaactcacaacttgatgct
atggccagacaagttcaacaattgtttccctattatcctcgcaacgtgattctcgaggac
ttgagaggaactcgatcgatcgaaatcacaattgaaaacattctggacagcagacttttg
cccccgcaccacgttattgaggaaccggaagcggagcctgcgactacgacgcaaaccacg
acggctcatatcttgcccattcctttggtccaggacaccttggatccgagactcgatata
ccagccgctgatagcggagaagagccatctaatcttggcggacgattctcgaaatcgtca
atggaaagggaaaggatcctgcagcgtaggaaagagcacatgcttctgacggctcgtcgg
aaatactttgagagacatccgcatcataatgagtctgatacatcgttggacgtttcgtca
ccggtgaatctgaacaacgttacgccaaggataagtctttctcataactga
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