KEGG   Neodiprion virginianus: 124296977
Entry
124296977         CDS       T09046                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
nvg  Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:nvg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:nvg04812]
    124296977
Cytoskeleton proteins [BR:nvg04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     124296977
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_DCAF4 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_HPS5 WD40_RFWD3 WDR90_beta-prop_4th eIF2A PROPPIN Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_VPS8 RMC1_N Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_LRRK2 Ge1_WD40 WD40_like
Other DBs
NCBI-GeneID: 124296977
NCBI-ProteinID: XP_046603438
LinkDB
Position
2:34074344..34116107
AA seq 843 aa
MASSTKRSWKLQDFAAHTSNVNCLALGHKSGRVLVTGGDDRKVNLWAVGKHNCIMSLSGH
ATAIECVRFGQTEDLVCAGSQTGVLKIWDLEHAKLARTLTGHGNGIRCMDFHPYGELLTS
GSLDKAIKLWDMRRKGCIFTYKGHTDTVNSLKFSPDGQWIASAGAEGKVKLWDLRAGKQL
REFSEHKGSVTTVEFHPHEFLLASGSTDRTVHFWDLESFQLVSSTEQSQSTAIRSLYFSQ
GGECLFAGSQDILKVYGWEPTRTLDSVPTGWGKVQDIAVAQNQLIGASFHIANVVLFVCD
LKKVAPFGGIPTPGSPFSHGNSLRKSFSKERPPELKKHKLDVKTIEEADKSGTDPEDEVM
LAEIPNVTDYRDVFQPNRSLSRTPPPELEAFVEPEELDPTQPQILQTLSTSLSNLNTNEL
DEEPPSIMKPVPVRVHPIKSSPPVQRNLITSTSQIRANLQANNASKNSRNISTIPPLRQS
ITPLLSKKNVGNQPLGPQRSNSTLTPRVAPMAAISPVMDDGKIKSRAPSPDSPKHCLKRQ
SSCKEREQGYESDYPIQINNIKHSPSDPALNRPNTAQSRSTSLNRNFSSSTPLSARNAVK
KQNKAQIQPNVKVEIRVPQLRPAVEEKVKDEFVPMIADKPSGLDMDEFLPNSYGGRALGY
SQLGVLPEMSEAEVLNSMMRGYESMMAVLNSRHRSLQIIYSLWHSKDLKAAVDSAVAMND
LAVIVDLLGVITLKPTIWNLDLCNSLLTSIGDLLQSKYEMYVSVGCTALRLILRNFSPVI
KSNVQAPLHTIGVDVSREERYHKCVSCYEKLMSVRSFLLTKQNMPGKIGATFRELSNMMQ
ALE
NT seq 2532 nt   +upstreamnt  +downstreamnt
atggcttcgtcaactaagagatcctggaaattacaggattttgctgctcatacatcaaac
gtcaactgtctagcattgggtcataaatctggccgagtgttagttaccggcggtgacgat
cgtaaagtcaacttatgggccgttggaaagcacaactgtattatgagcctgagtggacac
gcgacagcaatagaatgtgttcgtttcggtcaaacggaagacttagtttgcgctggatca
cagaccggtgtgctaaaaatttgggatctggagcatgcaaagcttgccagaactctgacg
ggacatggaaatggtattagatgcatggattttcacccctatggagaattattaacatcg
ggaagtctggacaaagcaataaagttgtgggatatgagaagaaaggggtgtatattcact
tacaaaggccatacagatactgtcaatagtttaaaatttagtcctgacggacagtggata
gccagtgctggagcagaagggaaagtcaagctctgggacttgcgagcaggaaagcaattg
agagagttttctgaacacaaaggatcggtaacaactgtcgaatttcatcctcatgaattt
cttttagccagtggtagtacagatcgtactgtccatttctgggatttagaatcatttcaa
ttggtttcttccacggaacaatcacagtccacggcaattaggagtctctactttagtcaa
ggcggagagtgtctttttgctggtagtcaggatattttgaaggtttacgggtgggaacca
acacgaacgcttgactcagtaccaacaggttggggaaaggttcaagatatagctgttgca
caaaatcaattgatcggagcttcttttcacatagcaaatgtagtcctgtttgtttgcgat
ttaaaaaaagtcgccccattcggaggtatccctacacctgggtcaccctttagtcacggc
aactcgttgaggaaaagtttttctaaagaaagacctcccgaattgaagaagcacaaatta
gacgttaaaacaatagaggaagcagacaagtctggtacagatcctgaggatgaagtgatg
ctagctgaaataccaaatgtcacagattacagagatgtctttcaaccaaacaggtcttta
tctcgcacgcctccccctgaattagaagcttttgtcgaacctgaagaattggatcctaca
cagccgcaaatacttcaaacactgtcaacgtcattgtcaaatttgaatacaaatgagttg
gatgaagagccaccatcaataatgaagccagtaccagtgcgtgttcatcccataaaatct
tctccaccagtccagcgtaacttgataacttctacaagccaaataagagcaaatctccag
gcaaacaatgcaagcaaaaattctagaaatatatcaacaatcccgccacttcgacaaagt
attacgccactgcttagcaagaagaatgttggaaatcaacccttgggacctcagagatca
aactcaactttgacacctcgagtcgctcctatggctgccatatctccggtaatggatgat
ggtaaaattaaaagcagagcgcccagtccagattctcctaaacattgcctgaagaggcaa
agcagttgtaaagagcgagaacagggctacgaaagtgattatccgatacagataaacaac
attaaacatagtccgtccgatcctgctttgaaccggccaaacactgctcaatcacggtca
acatcgttaaacagaaatttttctagttcaacccctttatcagctcggaatgcagtgaaa
aaacaaaataaagctcaaattcaacctaatgtaaaggttgaaataagggtaccacaacta
aggccagcagtggaagaaaaggtcaaagatgaattcgttccaatgatcgctgacaaaccg
agtggccttgacatggatgaatttttaccgaatagctatggtggcagggcattgggttac
tcccaattaggcgtcctcccagaaatgtcagaagccgaagtactgaacagtatgatgcgt
ggctatgagtccatgatggcagtacttaatagtcgtcatagatctctacaaatcatttac
tcgctatggcacagcaaagacctcaaggcagcggttgactcggcggtagcaatgaacgat
ttggctgttatagtcgaccttttaggagttattacgcttaaaccaaccatttggaacttg
gacctatgtaattctttgcttacctccatcggcgatctacttcaaagtaaatacgaaatg
tacgtatcagtgggctgcacggctctcaggttaatacttcgtaatttttcacctgtaatc
aagtcaaacgtccaagctccgttacatacgatcggtgtcgacgtttcccgcgaagaaagg
taccacaagtgcgtgtcctgttacgagaaattaatgtcggtgagatcgtttctacttaca
aagcaaaatatgcctggaaaaattggcgcgacatttcgagagctaagtaacatgatgcag
gctcttgagtga

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