Neodiprion virginianus: 124297160
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Entry
124297160 CDS
T09046
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvg03009
]
124297160
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
90S particles
Other 90S particles
124297160
Pre-60S particles
Other pre-60S particles
124297160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
VPS15-like_hel
CCDC117
DUF4277
UTP20
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
124297160
NCBI-ProteinID:
XP_046603826
LinkDB
All DBs
Position
2:12098094..12107763
Genome browser
AA seq
1307 aa
AA seq
DB search
MGKIKPRLGSRKKAKRWPKGQSSSSNPETKQHRDQARTRFFQENFGPGGLTSDALHKHDA
IQGTHQNVQNIEIDDDDETQATTIKTFNTFASDWSSCSNISFSRFLSGFQASSAMHKEML
AVLAAVTEVIKQNGGTESSTEYYAALMTTLEATETEESVAAVLSLLGMGLKTVPISVLRL
QFSQASQTFLQVLEKYATSENFLIQRTCIGCLSILLRSQEAAVWSSSSTVRILDAILVFT
VHSKPKLRKAAQHAVCSILKGSHIMKNDNPPAYHPAASQVAKHCLVQLEMASQPGGITAT
LHVLTMLKEIMHQLPKSHVKVICEELLKIMTMNNLLFTSCCLQAFHSLFISKPLETTLPP
TLNAQIINALYDYQPAPGDTQPTLAWLAVMQEAHCNLVQNSLQLCAANLPRILEKCTELW
LSDRSEVLSGASHTIKTLLQDCVAPLCKYEDGEKKYKTAISKSIHIIQQGMKYQYHSAWH
HVLHLLAIIFQIAGKTCQDQLLEILVALAELRDSYKFSYNSEVEYAVGAAVQSMGPEIVL
NTIPLQTSTDTIDLNRSWLLPTLKENIVQAPLSYFVKSLLPLATMCEQKSVALKSMNDGI
GSHSYQLLTSQIWALLPNFCNNPGDTKDSFKSIARILGIAISERKDLRLSVMASIRKLIT
RATDDGNKGDIEELAKFAKNFLPLLFNLYTSKPNGSDEEGQRLAALETIKIYLTISSKEL
AAELFDRALERMQSSDTDRFVKESILDLIRVLACHTDGARLLAVYKEFVPVLTDTKNPKE
QKKAYRFLEEICSSEKEACKEFIQQNRHGIQKMLLKSLSSTVASSKGARLRCLEHLVKSQ
PQLDQTKLLRSIVPEAVLCLKEVNERCRASAYQLLNTIAEQLLQTTKNLEKYIEMLVAGL
AGTPTLCSATLLALASVTYNYNGALGLETVKEIVKHACVLLTSPTREIALSAISYIKVYL
TIMPSPTVAPMLPTIVTALCDMTDDCQRHFRQKFRDVLVKLIRKYGADLIMGLVKPTATV
MLKRIKNLKKIQARKQKMKDQKKSETGSKDGVDDEEFNVKARPKTVEEILADSDDDFVDT
ETDDGVRGRKQKLKKKAWIHESEENIVDFVDAGAAKNITATQPGALDSTQSIRKKKEGGF
KTDEKGRLIIKDDDSDGEMEIKPKKLPFLGSDSENNSDDEDTKSTVSAAKTGRKRRLSGS
LDGISMRSDRPASKYQAGGSGIHRPITKNTPKNNPGSEYSAQKARGDIKKKGKPDPYAYV
PLTRSALNKRKKMKNAGRFKNIISGAKKGANVGRKNRDRPRKGVGRK
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaataaagccaagattgggtagccgtaaaaaagccaaaagatggcctaaggga
caaagttccagttcaaatcctgaaaccaaacaacaccgggatcaagcgcgaaccagattc
tttcaagaaaattttggtcctggcggtctaacctcagatgctcttcataagcatgatgct
atacaaggcacacatcaaaatgtacaaaatattgaaattgatgacgatgatgagacgcaa
gcaacaactattaaaactttcaacacatttgccagcgattggagtagctgttcgaacatt
tccttcagcagattcttgagtgggtttcaagctagttcagccatgcataaggaaatgttg
gcagttttagctgcagtcaccgaggtcataaaacaaaacggaggaaccgaatcttctact
gaatattacgcagcattgatgacaacactagaagcaacagagactgaggaatcagtggca
gccgtattatcactgttgggaatgggtttgaagacagttccaataagtgtccttagactg
cagtttagccaagctagccaaacctttcttcaagtattggagaagtatgcgactagcgag
aattttctgatccagcgaacatgcattggatgtctttccatattattgagatctcaggaa
gccgcagtttggtcaagttcgtcaaccgtgcgaatacttgatgcaatactagtgtttaca
gttcactccaaaccaaaattgcgaaaggctgctcaacatgcagtatgttcaatcctcaaa
ggaagccatataatgaagaacgacaatccacctgcatatcatcctgctgcgtctcaagtt
gcaaaacattgtctggttcagctggaaatggccagtcaaccaggtggaattacagcaact
ctgcatgtcctgactatgctgaaagaaatcatgcatcagctccccaaatcccacgttaag
gttatttgtgaagaactgctcaaaataatgacgatgaataatttgctcttcacttcctgc
tgtctacaagccttccacagtttgtttatatcgaaacctttggaaacaacattaccacct
accttaaatgctcagatcatcaatgctctgtacgattatcagccagcgcctggagacaca
cagccgactttagcgtggcttgccgtaatgcaagaagcacattgcaatctcgttcaaaat
tcattgcaactatgtgcagcaaatttacccagaattttggaaaagtgtacagaactttgg
ttgtctgataggtctgaggtattgagtggtgcatcacacactattaaaacacttttacaa
gattgcgttgcgcctttgtgcaaatacgaagacggtgaaaaaaagtacaagactgcgata
tctaaatcaattcatataattcagcaaggaatgaagtaccaatatcactctgcgtggcat
cacgttctccacttgcttgccattattttccagattgcaggcaaaacctgtcaggatcaa
ttgttggaaatattagtcgcgctcgcagaactgagggattcgtataaattttcatacaat
tccgaagtcgagtatgccgttggagctgctgttcagtccatgggtcctgaaattgttctg
aacacaattccactacagacttccacagataccatagatttgaacagaagttggctcttg
ccaacgctgaaggagaacatcgttcaagccccactttcctattttgtgaagtcattacta
ccgctggctacaatgtgcgagcagaaatcagttgctctgaagtccatgaatgatggaatt
ggctctcacagttatcagctgttgacatcgcagatttgggctttgcttccaaatttctgc
aacaacccaggtgatacgaaagacagtttcaagagcattgctagaatcttgggaattgct
ataagtgagcgaaaagatctgaggttatcagttatggcatcgatacgaaaacttataacc
agagcaactgatgatggcaacaaaggagacattgaggagttggcgaaattcgccaaaaac
tttcttcctttgctattcaacctttatacaagtaaaccaaacggttctgacgaagaaggt
caacgtcttgcagcactagaaactatcaagatatatttgacaataagtagtaaagaatta
gcagctgaacttttcgatcgcgcattggaacggatgcagtcttctgataccgatcgcttc
gtaaaagagagtatattggatttaatcagggtattggcttgccatacagatggtgccaga
ctccttgctgtttacaaagagttcgttcctgtacttacagatactaagaacccaaaggaa
cagaaaaaagcgtacagatttttagaagaaatatgtagcagcgaaaaagaggcctgtaaa
gagttcatccaacagaacagacacggcattcaaaaaatgctcctgaaatctctgtcttct
actgtcgcaagcagcaaaggggctcgtcttcgatgtttggaacatcttgttaaatcccaa
cctcaattggatcagacaaaacttctgagatctatagtacctgaagctgtgctgtgcctc
aaggaagtgaacgaaagatgtcgagcatctgcgtaccagctgctaaacactattgctgag
cagctacttcaaacgacaaaaaatcttgagaagtacatcgaaatgttggtcgcaggtctt
gctggcactccaacactctgcagtgcaactttgctcgcactggcctccgtaacttacaat
tacaacggcgcactgggattggagaccgtcaaagagatagtgaaacatgcttgcgtttta
ttgacttcgccaaccagggaaattgcactatccgccatttcctacatcaaggtgtatctc
actatcatgccctcgccaacggttgcaccaatgttgcccacaatcgtgacggctctctgc
gatatgactgatgattgtcagagacattttcgtcaaaaatttcgtgacgtgcttgttaaa
ttgataaggaagtatggagctgatctgataatgggattggtcaaaccaacggccacagtc
atgctcaagagaattaaaaatttgaaaaagatacaagcaaggaagcaaaagatgaaagat
caaaaaaaatcagaaaccggaagtaaagatggtgtggatgatgaggaattcaatgtcaaa
gccaggccgaaaactgttgaagaaattctggcagatagcgatgacgattttgtagataca
gagacagatgatggagttcgaggtcgaaaacagaagctaaagaaaaaggcatggattcac
gaaagcgaggagaatattgtcgacttcgtggatgctggtgctgctaaaaatattactgca
acgcaacctggagctttggactccactcagtcgattagaaaaaagaaagagggtggtttt
aaaacggatgaaaaaggtcgtttgatcatcaaagatgatgacagcgatggcgaaatggag
ataaaaccgaaaaagttaccctttctgggtagtgattctgaaaacaacagtgatgacgaa
gacacgaaatctactgtatcagcagcgaagactggtcgaaaacggagacttagcggtagt
ttggacggtataagtatgcgatcggatcgccctgcgtcaaaatatcaagctggtggatca
ggtatccataggccgattactaaaaatacaccgaaaaataatcccggcagtgagtattct
gcccaaaaagcaaggggtgacatcaaaaagaagggaaaaccagatccttacgcttacgtg
cctttaacccgttcggcactgaataaacgtaagaagatgaaaaatgccggaagatttaag
aacatcatatcaggtgctaagaaaggcgcaaatgttggacggaagaatagagacagacct
cgcaaaggagttggcagaaaataa
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