Neodiprion virginianus: 124297259
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Entry
124297259 CDS
T09046
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124297259
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
124297259
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
PTase_Orf2
Motif
Other DBs
NCBI-GeneID:
124297259
NCBI-ProteinID:
XP_046604048
EnsemblRapid:
ENSNVRG00000001590
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Position
2:complement(4001435..4009056)
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AA seq
1360 aa
AA seq
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MSNEAQISNIVNDILRVEPIEEAFSCFLVHHLDNEIEKIAGLQSELTSAMTGLNTEQQEN
GVRQFLNMAAALTNHSRLQLLLSLLENLVMSNVLPARLVCECILSCDKLQYQQEDFWVES
FNLIRRIIGGVDYKGVREIMKGCREKAQTIPARLNASVQPQLKALENVIEYIFDRNACLL
PGYFIVNEIQKAYPDNKNWPHWKLAKLLSGFVESFRATAQMVSIIGHSKMLPVVEHSGYA
DHVINPWRLDPTTLKFSLKGNLPYDQDLLKPQTELLRYVLEQPYSRDMVCSMLGLQKQHK
QRCVALEEQLVELVLLAMERSENDPPPTEGTDITVANHWLWLHLSSQLIYFVLFQFACFP
NIVMAIHDKLAGRELRKGRDHLMWVLLQFISGSIQRNPLSNFLPVLKLYDLLYPEKEPLP
VPDFSQALCTHQMAITCIWIHLLKKAQSEHLNIHRPIPHTLKVHHEFLQHLVMPNTSLCM
GSDYRIALLCNAYSTNQEYFSRPMAALVDTILGTQKGQQQQPLQPLQSNAALANGPTTPL
SMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGIKG
FISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQTQLHL
CVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARSMHVTAIVSG
TGADSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLNEFFQQNSVPKENKQQIKKAVE
EEYRNWASMSNENDIIAHFSVPGTPPLFLCLLWKMIFETDRISPIAYKILERIGARALSA
HLRKFCDYLVFEFANSVGGQHVNKCVDTINDMIWKYNIVTIDRLVLCLALRTQEGSEAQV
CFFIIQLLLLKAVEFRNRVQEFAKENSPEHWKQSNWHEKHLAFHRKYPEKFAPEGIMEQT
TGGPSQYQSLPVYFGNVCLRFLPVFDIVIHRYLEIPPVTKSLEILLEHLGCLYKFHDRPV
TYLYNTLHYYERKLRERPALKRRLVSAVLGSLCDIRAPNWALSEAYQLYMTRSPDDAVNW
VPELDYYVRLVRRIVETMSGIAHFPTTDWRFNEFPNPAAHALYVTCVELMAVPVAPNLIA
NSLLDVVAKGYTVVPSEQIHMWINCVGLLLAALPECYWSALHERLVETVTSRGLANWQYS
NLTPFQIFNFNITHNGLLENKYSYMIALAHSIWHHAGVGQITTMPQFIKEKLQPVVNSEE
QLIFACHLIGPTLARFNAERPRCVVELAVSLYEMLEQADRSQAHLKYMDPICDLLYHIKY
MFVGDMMKNEVECIIRRLRPALQMRLRFIAHLNIEEINSS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaggcgcaaatatcgaacatcgtcaatgacattcttagagtggaacctatc
gaagaagcattcagctgttttctcgttcaccatctggataatgaaattgaaaaaatagca
ggattgcagtcagaattaacatctgctatgacaggtctcaatactgaacaacaagagaat
ggcgttagacaatttcttaacatggctgctgcgctgacgaatcatagtcgcttacaactt
cttctgtcgttactggagaacttggtcatgagtaacgtattacctgcaagattggtttgc
gaatgtatcctcagctgtgataagctgcagtatcagcaagaggatttttgggtcgagtcc
tttaacctcatcagacggatcattggaggagtggattacaaaggtgtcagagaaataatg
aagggctgcagagaaaaggcacaaacgataccggcaagacttaacgcatctgtacagccg
caattaaaggccctggaaaatgttatcgaatatatatttgacagaaatgcatgtctattg
cctggctattttattgttaatgaaatacagaaggcctatcccgataataagaattggccg
cattggaaattagcaaaactgctctctgggtttgtcgagagtttcagagccactgcgcaa
atggtgtctataatcgggcactcaaaaatgctaccagtagtagagcactctggatatgcg
gaccatgtcatcaacccatggaggctcgatcctacgacccttaaattctccctcaaaggc
aatttaccctatgatcaagatctgctaaagcctcaaaccgaacttttaagatatgtcttg
gaacaaccgtacagcagagatatggtttgctccatgctaggcctccagaaacagcacaaa
cagaggtgcgtagcattggaggaacaactggttgaattggtacttctggctatggagcga
tccgaaaatgatccaccacccactgagggaacagatattactgttgcgaatcattggctg
tggctacacctttcttctcaacttatatacttcgtactttttcaatttgcttgtttcccc
aacattgttatggccatacatgacaagctagctggtcgagaattgcgaaaggggcgtgat
catctgatgtgggtcctattgcagtttatatctgggagtattcagcgtaatccgctgtct
aactttctgccagtacttaaactgtatgacctattataccccgaaaaggaaccactacct
gttcctgatttcagtcaggcattgtgcacacatcaaatggccatcacgtgtatatggatt
catttacttaaaaaagcgcaatccgagcacttgaacattcacaggccgatcccacacacg
ctaaaagttcatcatgaatttttacaacatttagttatgccaaatacatcattgtgtatg
ggatctgattatcgcatcgctttactgtgcaatgcttattcaacgaatcaagaatacttc
agtagacctatggctgcacttgttgacacaattcttggcacacagaagggacaacagcag
caacccttacagccactacagagcaatgctgctcttgcaaatggaccaacaacgccattg
tctatgtccattctagattctcttactgtacattctaaaatgagtctgattcacagtatt
gttacgcacgttatcaaactagctcaatctaaaagcaacatggctcttgctcctgccctt
gtcgagacctacagcagattgctggtgtacactgaaatagaaagcctcggaatcaaaggc
ttcataagtcaactgcttcccacagtattcaaatctcatgcttggggaacactgtatact
ttgctcgagatgtttagctacagaatgcatcatattcaaccacattacagagttcagctg
ttgtctcatcttcacagtctcgccgcagtaccacaaacaaatcaaacccaactccatctc
tgcgttgaaagtacagctcttaggctaataactggtttaggatctgccgaagtgcaacct
caattatcccgctttttatcagagcctaaaacgctggtgtctgctgaatctgaagagttg
aatcgagctttagttctcacactcgcaagatcaatgcatgtcacagccattgtttcaggg
acaggagcagattcattgagtggtacatggtgcaaggaactgctgaatacaatcatgcaa
aatacccctcactcttgggccaatcatactctccaatgttttcctccagtactgaatgaa
tttttccaacaaaatagtgttcctaaggaaaacaaacaacagatcaagaaagcagtcgaa
gaggaatatagaaattgggcatcaatgagcaatgaaaatgatataatagcacatttctct
gtgcccggaacaccacccttgtttctatgtctcttatggaaaatgatatttgaaacagat
cgtataagtccaattgcgtataaaatattggaaagaattggcgcaagagctctttcagcg
catcttcgaaaattttgcgactacttagtttttgaatttgctaacagcgtcggaggtcag
catgtaaacaaatgcgttgataccattaatgacatgatctggaaatacaacattgtgaca
attgataggctggtgctctgtttggcactacgaacacaagaaggcagcgaagctcaagtt
tgctttttcattatccaattgcttttattgaaagctgttgaatttcggaaccgcgttcaa
gaatttgcaaaagaaaattctccagagcactggaagcaatcaaattggcatgaaaagcat
ctcgcatttcatcgaaaatacccagagaaatttgctcctgaaggaataatggaacaaacc
actggaggccccagtcagtaccaaagtctgcctgtatactttggaaatgtgtgcctacga
ttcttaccagtattcgacattgtgatacacagatatctcgagatacccccagttactaag
agtttagaaatattactagaacacttgggatgtctctataaatttcacgatcgacctgtc
acatacctttataacacgctgcattactacgaaagaaaacttagggaaaggccagcactg
aagcgacgcctagtctctgctgtgcttggctcattgtgtgatattcgggctcccaattgg
gcactatccgaagcttatcagctatacatgacgcgatctcctgacgacgcagtcaactgg
gtgccagaattagattattatgttcgacttgtgcgtcgtatcgttgagaccatgtcaggg
atcgcacatttcccaacaactgactggaggttcaatgaatttccaaatcctgctgcgcat
gctctttatgttacctgcgtggagctcatggctgtacctgttgctccaaatttaatagcc
aattctttgcttgatgttgtcgccaaaggatatacagttgtaccatcagaacagatacac
atgtggatcaactgcgtaggattattgctggctgctttacctgagtgttactggtcagcc
ctccacgagcgccttgtggaaacagtgacgagtcgtggactggcgaactggcaatatagc
aacttaactccatttcaaatattcaattttaatattactcacaatgggttattggaaaac
aaatatagttacatgatagctctggcacattccatttggcaccatgcaggagttggtcaa
atcacaactatgccacaattcatcaaagaaaaattgcaaccagtcgtcaacagcgaagag
caattgatatttgcttgccacttgataggaccgactttggcacgatttaatgcagagaga
cctcgatgcgtcgttgagctcgctgttagtctgtatgaaatgcttgaacaagcggaccgt
tctcaagctcatctcaaatatatggatccgatttgcgacttgctataccatatcaaatac
atgtttgtgggtgatatgatgaaaaacgaggttgaatgcataattcgcagactcaggcct
gcgctgcaaatgcgccttcgtttcatcgcccacctcaacattgaggaaataaactcatcc
tga
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