Neodiprion virginianus: 124297338
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Entry
124297338 CDS
T09046
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124297338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124297338
Enzymes [BR:
nvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124297338
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124297338
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
124297338
NCBI-ProteinID:
XP_046604218
LinkDB
All DBs
Position
1:20833476..20865359
Genome browser
AA seq
1134 aa
AA seq
DB search
MGEMKSNDFNSLKRAEKFRKVAKHIEDKWKLVPAFLKGKGLVKQHIDSFNYFINVEIKKI
VKANEKVLSDADSLFYVKYLNVYIGTPDVEESFNVNRITTPHECRLRDLNYSAPISVDIE
YTRGNQRIIRNNLLIGRMPIMLRSSNCVLNNKSHFELAKMNECPHDPGGYFVINGQEKVI
LIQEQKLRNRIILEEDNKGCIVSSCNSSTHERKTKTNVVGKGGKYYMRHNIFQDDIPIVA
VFKAMGIVSDQEIMQLIGTEEEYMRRFSASLEECHTANVFTQDQAIRYLSNRRKQKRFPT
SKMGVVDEIKDILAINILSHVPVVDFNFKVKATYIALMIRKVMQGQIDKTLIDDRDYYGN
KRLELAGSLLSLMFEDLFKRFNWELKQIADKNIPKIKAAQFDIVKHMRQDQITNGLAFAI
SSGNWTIKRFKMERQGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMM
CPSDTPEGEGCGLVKNLALMTHITTEVEEEPIIRLAYNLGVENVNILGGEEINNKNVYMV
FLNGNILGITKNYIRLVNVFRLLRRKAMINGFISIYPQHHHRCVQICSDGGRLCRPYIIV
KDGESLVQQKHIEALKHGFKTFDDFLHEGLIEFLDVNEENDSSIAFNESQIEAGTTHLEV
EPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYNLVYPQAPM
VKSRTIELINFDKLPAGQNATVAVMSYSGYDIEDALILNKAAIDRGYGRCLVYRNAKCTL
KRYANQTYDRIMGPMIDSNSKKPIWKHEIIDNDGIAAPGEMVENKKVMVNKSMPAATMNP
VNPANVQTQPDYCDVPVLFKGSVPAYIEKVMVSSNADDAFLIKLLLRQTRRPEIGDKFSS
RHGQKGVTGLIVEQEDMPFNDLGITPDMIMNPHGFPSRMTVGKLIELLAGKAGVAEGKFH
YGTAFGGSKVEDVCEELVKHGYNYMGKDFFYSGITGEPLQAYIYSGPVYYQKLKHMVQDK
MHARARGPRAVLTRQPTEGRAKEGGLRLGEMERDCLIGYGASMMLIERLMISSDMFDVDV
CNTCGLMAYRGWCHSCQTSASISTISIPYSCKLLFQELQSMNIVPRLTLKNSGD
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatgaaatcgaatgatttcaacagtctcaaaagagctgaaaaattcagaaaa
gtagccaaacatatcgaggataagtggaagctcgtccctgcattcctcaaaggcaaaggc
ctcgttaagcaacacattgattcgttcaattatttcattaatgttgagataaaaaaaatc
gtcaaggcaaatgagaaagtattaagtgatgctgattccttgttctacgtcaagtacctg
aatgtttacattggcacaccagatgttgaggaaagtttcaatgttaatcgcataacaacg
ccacatgaatgtcgactcagggatctaaactattctgcacctatatcagtggacattgaa
tataccagaggcaatcaacgcatcattagaaataacttattgattggaagaatgcccata
atgttgcggagttccaattgtgttctgaataacaagtctcacttcgagttggcaaaaatg
aatgagtgccctcatgatccgggtggttattttgtcataaatgggcaggaaaaggtgatt
ctgatccaagaacagaaattgagaaacagaattattctggaggaagataacaaaggttgt
attgtcagttcatgcaacagttccacccatgaacgaaagactaaaacaaacgttgttggg
aaaggcggaaaatattacatgagacataatatttttcaagatgatattcctattgtagca
gtatttaaggctatgggcattgtatctgatcaagaaataatgcaactaataggaactgaa
gaagaatacatgagaaggttttcggcttcgttagaagaatgtcacacagcaaatgttttc
actcaagaccaagcaatcagatatttaagtaatagaagaaaacagaagcgatttcccact
agtaaaatgggcgttgttgatgaaataaaggatatcttggcaataaacatcctatcacat
gttccggtagtagacttcaacttcaaagtcaaagcaacttacattgcattgatgatacgt
aaggttatgcaaggccagattgataaaacgctaatcgacgacagagattattacggtaac
aagaggctggaattagctggttccctactgtctctcatgtttgaagatttattcaaaaga
tttaactgggagctcaaacaaattgcagacaaaaatattcccaagatcaaagcagcccag
tttgacatcgttaaacacatgaggcaagaccaaattacaaatggtttagcatttgctatt
tcttcgggtaattggaccataaaacggttcaaaatggaacgtcaaggtgtaacgcaagtc
ctttcaagattgtcgtatatatctgccctaggaatgatgaccagagtaaattcacaattt
gaaaaaacaaggaaagtttctggcccccgctccctacagccttcccaatggggaatgatg
tgtcctagcgatacgccagaaggagagggctgcggtctagtcaaaaatctagcattaatg
actcacatcacaacagaggtggaagaggagccaattatcagactagcctacaatcttgga
gtagaaaacgtcaatattttgggaggtgaagaaataaacaacaaaaatgtgtacatggtt
ttcttgaacggcaatattctaggaattactaaaaattacatccgacttgtcaatgtattc
agattgttacgcagaaaggccatgatcaatggcttcatttcaatatatcctcagcatcat
catagatgtgtgcagatatgttcggatggtggcagactgtgcagaccttatattatagtc
aaagatggagaatctcttgttcagcaaaaacacatcgaagcactaaaacatggcttcaaa
acgtttgacgacttcttgcacgaaggtctcatagaattcttagatgtgaacgaggaaaat
gatagctcaattgctttcaatgagtcccaaattgaagcaggaacgactcacttggaagta
gagccatttactttgctcggcgtttgtgctggcttagtgccgtatcctcatcacaatcag
agtcctagaaatacatatcagtgtgctatgggtaaacaagctatgggaactataggatat
aaccagcgtaatcgcatagatacactaatgtacaatctggtttacccgcaagctccaatg
gtcaaatctaggaccatagaactgatcaatttcgataaactccccgctggacaaaatgca
acagttgcggtgatgtcctacagtggatacgacatagaggatgcgctaattttaaataaa
gcagcgattgacagaggttatggaagatgtttagtctacagaaatgctaaatgtacttta
aaaagatatgcaaatcaaacttacgatagaataatgggccctatgatagattcaaattct
aaaaaacccatttggaaacatgagataatagacaatgatggtatagctgcccctggagaa
atggtagaaaataaaaaagtcatggtgaacaaatctatgcctgcggcaacaatgaaccct
gtaaatcctgctaatgttcagactcaacctgattattgtgacgtaccagttctcttcaaa
ggatcagttccagcctacattgaaaaagttatggtatccagtaatgcggatgatgcattt
ttaataaagttgttgctacgacaaactagacggcctgaaattggtgataaatttagtagt
cgacatggacagaaaggtgtaacaggtctgattgtggaacaagaagacatgccattcaat
gacctaggtatcacaccagacatgatcatgaatccacatggatttccctcaagaatgaca
gtaggtaaactcatcgaattacttgctggcaaggctggtgtagctgaagggaaattccac
tatggaacagcgtttggtggttcaaaagtagaagatgtttgcgaggaattggtaaaacat
ggctataattatatgggtaaagattttttctactctggtattaccggggaaccactccag
gcatatatatactctggtccggtgtactatcagaaattgaagcatatggttcaagacaag
atgcatgctcgtgctagaggaccaagagcagttttaacacgccagccaacagagggaaga
gctaaggaaggaggtttgcgcttgggcgagatggagagagattgcttaattggttatggt
gctagcatgatgttaattgagcgtttgatgatttcaagtgatatgttcgatgttgatgta
tgcaatacgtgtggactaatggcgtacagaggctggtgtcatagttgccagacaagtgct
tccatttctacaatatccataccttattcatgtaaacttttattccaagagttacaatct
atgaatattgtaccaaggttaacgctgaagaacagtggtgactga
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