Neodiprion virginianus: 124297388
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Entry
124297388 CDS
T09046
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvg03000
]
124297388
Transcription factors [BR:
nvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124297388
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
DDHD
CSRNP_N
VPS13_N
Motif
Other DBs
NCBI-GeneID:
124297388
NCBI-ProteinID:
XP_046604317
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All DBs
Position
2:13389724..13697362
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AA seq
496 aa
AA seq
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MLTMETDLKGGSLHGQMPPHPHQGVSPMGHHTGVSPYGALGSIVHSPALSGSPPTAGGLG
GLGLQHHHQASSHHYAAMQSQQQQQQQQQQQQQQQQQQSMHALASQQSAAQQQQQQQAAQ
HHAHQQQAPQHQPPNNNNNTSKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEIS
KRLGAEWKLLSETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLIKKDKFPMGGGVP
GVGGMLGVDQRNVAAGAGQQTQLPRDVYQMPNGYMPNGYMMHDPAVTYQQHPYGGHMGAA
AGYPRYDMGHHMGGGSPSPINSYMNGYGGYGGTTVPGGSPSPYHQPQPGSQMSSHSPSGS
SIKSEPTSPASGGIHTPTPTGPSSTGAPVKREYMGQQQAPQPQGDLRQMISMYLPQSAEQ
GVPQHGGSVYSPGPSPDPLAQHHSGVPPLTHMSENERKMLNPENGCYAESVRAWYHYPEE
AWRPPPRRYSSMPPSP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatggagacggacctcaagggcggcagcctccacgggcaaatgcctccgcac
ccacaccagggcgtctcgcccatgggtcaccacaccggggtgtcgccctacggagccctc
ggctctatcgtccacagtccagcgctgtcgggcagccctccaaccgccggaggcctcggg
ggccttggtctacagcatcatcatcaggcctcgtcgcaccactacgcggcaatgcagtcc
cagcaacaacagcagcagcaacagcagcagcaacaacagcagcagcaacagcagagcatg
cacgcgctggcgagtcagcaatcggcggctcagcaacagcagcagcagcaggcggctcag
catcacgcgcatcagcaacaagcgccgcagcaccagccgcccaacaacaacaataataca
agcaaaaacaacaacatcgatcgagtcaagagaccgatgaacgcgttcatggtctggtcg
aggggtcagcggagaaaaatggcccaggaaaatccgaagatgcacaattcggagatatcg
aagcggctcggggccgagtggaagctgcttagcgagaccgaaaagcgaccgttcatcgac
gaggcgaaacggctgagggccgtccacatgaaggaacatccggactacaagtacagaccc
cgcaggaagacaaagacccttattaagaaggacaagttcccgatgggcggtggcgtccca
ggggtaggcggcatgctaggcgtcgatcagaggaacgtggccgccggtgccgggcagcag
acccagttaccacgagatgtttatcaaatgcccaatggatacatgccgaacggatacatg
atgcatgatccggcggttacgtaccagcagcatccgtacggtggacacatgggcgccgct
gccggctacccgaggtacgacatgggacatcacatggggggcggaagtcccagtccaata
aacagctacatgaacggttacggaggatacggcgggaccaccgttcccgggggctcgcct
tcgccctatcaccagccccaacccggatcgcaaatgtcgagccacagtccgtcgggcagt
agtatcaaatccgagccgacaagcccggcgagcggcggcatccacacgccgacgccgacc
ggaccctcgtccaccggggccccggtaaagcgggagtacatgggccagcagcaggcccct
cagccccagggtgacctacggcagatgatatcgatgtatctgccacagagcgcggaacag
ggtgttcctcagcacggtggcagcgtgtattcacccgggccatcgcccgatcccctggcc
cagcaccattcgggcgtaccgccgctaactcacatgtctgaaaacgagcgaaaaatgctg
aatccggagaatggatgttatgccgagtctgttcgtgcatggtaccattacccggaggag
gcttggagaccaccgccaagacggtattcctcgatgccaccgtcgccgtga
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