Neodiprion virginianus: 124297451
Help
Entry
124297451 CDS
T09046
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03440
Homologous recombination
nvg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124297451
03450 Non-homologous end-joining
124297451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvg03032
]
124297451
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124297451
DNA replication proteins [BR:
nvg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
124297451
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
124297451
BRCA1-C complex
124297451
NHEJ (non-homologous end-joining)
MRX complex
124297451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_29
AAA_16
AAA
AAA_22
AAA_13
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
124297451
NCBI-ProteinID:
XP_046604456
LinkDB
All DBs
Position
2:complement(11365830..11378291)
Genome browser
AA seq
1369 aa
AA seq
DB search
MSRVRRLGISGIRNFGPGDDERGLQTIRFSHPLTMIFGPNGTGKTTIIEALKYASTGDFP
PGCGANNQNSFVHDALLTDECSVKGVVIAEMCDTKGNIVTVSRRLLSVQKKFKKGCKVLD
TTLSTKNIKTGENVSISHRCADVDLEMGLALGVSKPILNHVIFCHQEDSTWPLEDGKKLK
ERFDQIFDSDKYNKAVERIRKFNNKIKNDLRVTKAQRESLEILLEESNQKKKSLEKYETR
LVKSIQKVSEVVEKMKPLNEKMNELRDSEAHYIKLHTEKETKKTEYGLIKQQIMELKESI
QVLHDGTAEELQKEIAAFDNTRVEMESEMEMLKNKSRDMNKEESKLKVTISNKQLSIGKL
KEQAQALEKNISLRNCKLSQMRTEWGLDEVGEEVTETEAAVGFDQLKDKLTEMERNIKDI
ALKHQAVEKTLQEELDALRDQKSKLESEMVLFKRQIAEKRTETRRIRAQIEEVNMLASQL
ELVDSKLQEANTKLDTMAASFDVDAVKKNIEDEIKKRDQMELSLDKLDEEVKLLQQQSSL
HAELDLLRSSLAVKEKDIQKLKNKHQANLKMLLKTEVLPESNLKHTLSGIHDSFSEQIKQ
LNHQLQKEQRVLTTLETTKKHHEHEMKEKNSELEDIQDKIATMCHGIDYEEVLLHAKKTV
QDLQDSKGMYTYKSIAYKDYIKKTDSCCPLCHRNFDSQQEIEEFKSELNEEVNKYPNQLK
TCEEKLKVQQERYDSLLQLKPLVDKVKQIEETTLKKLRNDLIQVKQKLSESHARVEKLQL
QIAEPESKLAQCKDIVCDVAQWDQYSAEVVKLNQSIARVKARLSDKVGERSMQEAQTEQE
LLRKSLSTIRKRIEKLQLSLSTHNDKLQQARESRNRLVEEQLRMKSEVQKLQQLQDKLKD
LHAEEVSLQENVQQLQVQLGPVNQNLAAKNDSLQKIKREHRESLDNDRSVVSQKSRSLHD
LNTIQSQIDNSIRNGVTDSLRKSELEMKKYQQMDEELQKNKIEVTTKINEIINEISKQET
RKRDMSDNMILKEKGAAAVVLQREITELREKLGNMNYRQLLDHKKKLIDEEELLIREKNL
EQGGQDEMERNIKQLKRELNKEVYRLALKNYMRKSAEVVVQEEAINDLVAYTTALDRAII
EFHEERMASVNRIILRLWTQIYKGKDTTAIQIHTDSTEGMGNKKRVYNYKVVQEKQKVTM
DMKGRCSAGQKVLASIIIRMALAETFAKNCGIFALDEPTTNLDVHNIKSLAQALVSIVNL
RSKQQKNFQLIVISHDEDFITQLGKVDKVGKVYELYRNEKGLTEVKELCIENNATFDDCS
QNGESSGEEDAADVERRTRKRKELAEERKNLLKGNSSVSPPRKKRNERE
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggtaagaagattagggatttctggaatccgaaacttcggccctggcgatgat
gagaggggattacaaacaataaggttcagtcacccgttgactatgatttttggaccaaat
ggaaccgggaaaacaaccattatcgaggccctaaaatatgcgagcacaggggattttccg
cctggctgtggtgcaaacaaccagaattcattcgtacacgatgctttgctaaccgacgaa
tgctccgtaaaaggtgtggtgatagctgagatgtgcgataccaaaggaaacatagtaacg
gtatcgcgaaggctattatctgttcaaaaaaagtttaagaaaggctgtaaagtcctggac
actactctgtctacaaagaacataaaaacgggagagaacgtatcgataagccatcgctgc
gccgatgtggatcttgaaatgggtttggctttgggagtgtcaaaacctattttaaatcac
gtaattttttgtcatcaagaagattcgacatggccattagaagatggaaaaaaactgaaa
gaaagattcgatcagatttttgactctgataaatacaacaaagcagtcgagagaattaga
aagtttaataacaagataaaaaacgatcttcgtgttactaaagctcagagagagtcgttg
gaaattttgcttgaagaatctaaccagaagaaaaagagcttggaaaagtatgaaactcga
ctggtaaagtctattcaaaaagtttctgaagttgttgaaaaaatgaagcctcttaatgag
aaaatgaacgaacttcgtgattctgaagcacattacatcaagttacatacggaaaaagaa
acaaaaaaaactgaatatggactgataaaacagcaaataatggaattgaaagagagcata
caagttcttcacgacgggacagcggaagaactgcaaaaagaaattgctgcattcgataat
acacgggttgaaatggaaagtgagatggaaatgctgaagaataaatcgagagatatgaac
aaagaggaaagcaagttaaaagtcactatcagcaataagcaattatcgattggaaagttg
aaagagcaggctcaagcgttggaaaaaaatatttcgctccgtaactgtaaacttagtcaa
atgcgaacagaatggggtctcgatgaagttggagaagaagtaacagagacagaagctgct
gttggtttcgaccaattgaaagataaattgactgagatggaacggaatatcaaggacata
gcgctcaagcatcaggctgttgaaaaaacattacaagaggaattggatgccctcagagat
cagaaatctaaactcgaatcagaaatggtcctgttcaaaaggcagatagccgagaaacga
acggagacaaggagaattcgtgcgcaaatagaggaagtgaacatgctagccagccaattg
gagttagtcgactctaaattgcaagaagcaaatacaaaacttgataccatggctgcaagt
tttgacgttgatgctgtgaaaaaaaacatagaagatgaaatcaaaaagcgggatcagatg
gaattaagtttggataaattggatgaagaagtgaaattacttcagcaacaaagttcacta
catgctgaattggatctgctcagatcatctttggcagtaaaagaaaaggacattcagaag
ttgaaaaacaagcatcaggcgaacttgaagatgcttttgaaaaccgaagtattaccggaa
tcaaatttgaaacatactcttagtggaattcacgatagctttagtgaacaaatcaaacaa
ttgaaccaccaattgcagaaagagcaacgtgtgctgaccacacttgaaactacaaaaaaa
catcacgaacatgaaatgaaggaaaaaaatagcgagcttgaggacattcaagataaaata
gccaccatgtgccatggtatagactacgaagaagttttgctacatgcaaagaaaaccgtg
caagatttgcaggattccaaaggaatgtatacttacaaaagtatagcgtacaaagattat
ataaagaaaacagattcctgctgtccgctctgtcaccgtaatttcgatagtcagcaggaa
attgaagaattcaaatctgagttgaacgaggaagtgaacaaatatcctaaccagttgaaa
acttgtgaagaaaagttgaaagttcagcaagagcggtacgattctttgctgcaattgaag
ccacttgtcgacaaagttaaacaaatagaagaaaccaccttaaagaagttgagaaacgac
ttgattcaagtgaaacagaaattatcagagtctcacgcgcgagttgagaaactgcaacta
cagattgctgaacctgagagtaaactagcgcaatgcaaagacattgtctgtgatgtagca
cagtgggatcagtattctgcagaagtcgtaaaactgaatcaatctattgctcgagtcaaa
gctcgtctttctgacaaagtcggcgagaggtctatgcaagaagcacaaaccgagcaagag
ttgttgagaaaatctctcagcactatacgcaaaaggatcgaaaaactgcaattatcatta
agcactcataacgataaattacaacaggcaagagagtctagaaatagactggtcgaggag
caattgagaatgaagtctgaagtacagaaactacagcagctgcaggacaaattgaaagac
ttgcacgctgaagaagtatctctacaagaaaacgtgcagcaattgcaggtgcaattggga
cccgttaatcagaatctggcagccaaaaatgattcactccaaaaaataaagcgagagcac
cgagaatcgctggacaacgatcggagtgttgtatctcaaaaatcaagaagcctgcatgat
ttgaacactatccaatcgcaaattgataatagcatccgcaatggagtaacggactcgttg
aggaaatctgaattggaaatgaagaagtatcaacagatggatgaagaattgcaaaagaat
aaaattgaagttactacaaaaattaacgaaataattaacgaaatctcgaaacaagagacc
cgcaaacgcgacatgagcgacaacatgatattgaaggaaaagggcgcagcagccgtagtg
cttcagcgtgaaataacagagttacgagagaagttaggtaacatgaattatcgccagctg
ttagatcacaagaaaaaactaatagacgaggaagaacttctcattcgcgaaaaaaacctc
gaacaaggagggcaagacgaaatggagcgtaatattaaacagttgaaacgtgaattgaac
aaagaagtgtatagattggctcttaaaaattacatgcgcaagtccgctgaagttgttgtg
caagaggaagcaataaacgacctcgtggcgtatactacagccttggatagggcaataatt
gagtttcacgaagaacgaatggcttcagtaaaccggattatactaagattgtggacgcaa
atctataagggtaaagatacgacggctattcagattcatacagattcaaccgaaggaatg
ggcaacaaaaaaagagtttacaattacaaagttgttcaagagaaacaaaaggtcactatg
gacatgaagggacgttgcagtgcagggcaaaaggtacttgcgtcaatcatcataagaatg
gccttagctgaaacatttgctaaaaattgtggtatatttgcattagatgaaccgacaaca
aaccttgatgtgcataacataaaaagtctagctcaggcactggtttcaattgtgaatctt
cgttctaaacaacagaagaatttccaattgatcgttattagtcatgacgaagactttata
actcaactaggtaaagttgacaaagtcggaaaagtttacgaactttatcgaaatgagaaa
gggctgactgaggttaaagagttgtgcattgagaacaatgcaacatttgatgattgctct
caaaatggagaatcctcaggtgaagaagatgccgcagacgtggaaaggcgtacacgtaaa
cgaaaagaacttgccgaagaaagaaaaaatttgctgaaaggcaattcgtccgttagtcct
ccacgcaagaagagaaatgagagagaatga
DBGET
integrated database retrieval system
