Neodiprion virginianus: 124297456
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Entry
124297456 CDS
T09046
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
nvg
Neodiprion virginianus
Pathway
nvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124297456
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nvg02000
]
124297456
Transporters [BR:
nvg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
124297456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
AAA_30
RsgA_GTPase
AAA_29
DLIC
Motif
Other DBs
NCBI-GeneID:
124297456
NCBI-ProteinID:
XP_046604474
LinkDB
All DBs
Position
2:complement(22552964..22601197)
Genome browser
AA seq
1752 aa
AA seq
DB search
MCVLKGALLSGGLEQESSYGFFSHNLYIDSKVRLRMGSFGVYMSQLRAMLVRNLLLKKRD
KRKTTAEIILPLYTLGILIIVKVLIPNPNYPAMTTPRVNGGVFDDFSQMQNHTIAVVPNT
TETLTFLNCVNTLWMSMWDTPVKIPLNFMIFDTEDDLQAAYWRDPSSVPMAVIFENPLPV
SDRLEYEIRTNPSYQSTPSPTEMYSSPVTCRKDTSHWMGGILSMETGGSCPVKNYYDSGF
IAVQLLLDVTKIRLKTEKNITVPTIKLEMFPKEAYTANWILYFRVVIPLYMVLALSQFIT
YLLILIVGEKENKIKEGMKIMGLKDSVFWMSWFIIYAVFVLLLSAVAVVLLFTLQMFQHT
HFLPIFLLVVLYSFSVIMFGFMITPFFDKSRTAGVLGNFAVTILSLMYFIQVFVDDSSSI
AFWVASLISPSGVALAMDKALVLDLQGQGVNFDNLWSGPGIPFGGSLIMMTLDIFLYSLL
AYYLDSVVPSEYGVKRSPFFCFTPGFWCRRKVPLVPSSNGESNSFIPGEETNRDVEPVVR
EMKGREAIRIVDLYKSYQKCRKPEVKAVNGINLTIYEGQITAILGHNGAGKTTLFNILTG
LTAPSGGTALIFGYDVRDHNDMQMIRSMTGVCPQHDILFDLLTPREHLEFFAAVRGIPRT
MIEMEVKKTLKDIDLTEKADAFAKYLSGGQKRKLSVGIAIIGDPKIIILDEPTAGVDPYS
RRQMWSFLQSRRHGKVILLTTHFMDEADILADRKAVISKGKLRCCGSSLFLKNKFGIGYH
LTLVLEGNPREHAITRLVSSHVSKAEKARRHGRELSFILPHNSVENFAPLFSAIEQEIKT
KNYRLGISSYGVSMTTLEEVFLHLERDEETECTMDNLSKKMVRNRALSRSLSLQSKSTSY
QSLQNEGAAVQADGQIKAAGDVPDGVHNEKNPVVLGLGLDPVKTRPNFCQILKAMLRLRI
LRLFRNIQLLYFTIVAPLALVALSLYINSIQTVDIRMQSLDLNPDTYGKETRILYTNNTD
KNITPLMNYIIKDIKEVDEYDGSFVDLLHVAPRMAAFNINDYDIASLNLTMMYNDTMQHS
LPILVNIISKAMYRLLTGDTADPRPIQVKTHPFQQTSQPQEFNIGIGSSALFIGMIFVLI
PIILAVDMVYDREIKAKNQLRVNGLSFSMYFLTYFIVLAGLMAVISLCILGIIFIFNVPS
LQEPPALITLAVLLMLYCPSSILFSSCLSYIFDKMDSAQSILPNIVTIVGMVPFLLVMGL
DMLGLGGTAAFALHVVLSLLNTMYVPYAAVYYVDRVHLMCSINAACHHLTMSDYLTTEII
LMAVGVILHIPIWFIILVMLDIKKTGGNISDALKYFLRNGGSIGEEIMENSDVGEHEDGD
VKAERQRVFNLMAASVQEPPVVMVQNLRKEYRNREITPCSCCTKRDDEPAPKRKVAVRNL
SLAVEPGEVFGLLGHNGAGKTTTMKIIIAEEAATRGRVQIGGNNITSQITEAFRQMGYCP
QHDAQWKNITVREHLECYAAIRGVPPSEIGRIVDLYLSGLQIHEHADKQSQECSGGTRRK
LSFAMAMVGGPKVVLMDEPSTGMDPRSKRFLWDTILASFQVSVAQGGRGAILTTHSMEEA
DALCSRVGIMVKGELRCIGSTQHLKNLYGAGYTLEMKLLGGDCTPTTPSGDRISGLKEFV
AGLFPDATLEESFADRLVFGVPQHAVQSLAECFTQLEKAKMELDIEEYSFSQTTLEQVFL
KFSHYDEVNGGE
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtacttaagggggcacttctatctggcggcttggaacaagagtcaagctatgga
tttttttcccataacctatacatcgattcaaaggtcaggctgaggatgggatccttcggg
gtgtacatgtctcagctacgggcaatgctcgtgcggaatctcctcttgaagaaacgagat
aagcgaaaaacaacggcggagattattttgccactctacaccctcggaatactgattatc
gtcaaggtcttgatacccaacccgaattatccagcaatgactacgccgcgggttaacggt
ggcgtgttcgacgacttcagccaaatgcaaaatcacacgatcgcagtggtgccaaacact
actgagaccctgacctttcttaactgcgtgaacactttgtggatgtccatgtgggatact
ccggtgaagattcctctgaatttcatgatcttcgacacggaagacgacctgcaggctgcc
tattggcgtgacccttccagcgtacctatggccgtcattttcgaaaaccctctgccggtg
tcggaccgcctggaatacgagatacgaacaaatccttcgtatcagtcgacaccctcacca
acggaaatgtattcgtcacctgtcacctgtcgaaaggacaccagccactggatgggcgga
atcctatccatggaaactggaggctcgtgcccggtcaaaaattattacgactccggcttt
atagctgtacaactgttattggatgtaacgaaaataagactcaagacagaaaagaatatc
acagtgcctacaatcaagctagagatgtttccaaaagaagcatatacggcgaattggatt
ctctacttcagagttgtaatcccactttatatggtcctggcactatcgcagttcattact
tatttattgatactaatcgtcggcgagaaagaaaacaaaattaaagaaggaatgaaaatt
atgggtcttaaggattctgtgttttggatgtcatggttcattatatacgctgtttttgtc
ctgctactctccgcagttgcggtagtcctcttatttactctccaaatgtttcagcacact
cattttctgcccatatttcttctggtggtgttgtacagtttttcagtcataatgtttgga
tttatgattacacctttcttcgataaatcacggactgctggtgtcttgggaaatttcgca
gtgactattctaagcctgatgtactttattcaagtttttgtggatgattcgagttcaatt
gcattctgggtggcttccttgatcagcccttcgggggttgctctggcaatggacaaggcc
cttgtcctggacttgcaaggccaaggtgtgaatttcgacaatctatggtcaggcccaggg
atcccctttggtggaagtctcatcatgatgacgttggacattttcctgtacagcctgttg
gcctattatctcgattcggtcgttcctagtgaatatggcgtgaaacgatcgcctttcttt
tgtttcactcctggattttggtgcagaagaaaagttccactggtgccatcgtcgaacggg
gaatctaactcttttatccccggtgaagagacaaaccgggatgttgagccggttgtccgt
gagatgaagggaagagaagccatcagaatagtcgacttatacaaatcgtaccaaaagtgt
cggaagcctgaagtgaaggccgttaatgggatcaatctcactatttacgaaggccagatc
accgcgatcttaggccacaacggtgcaggcaagacgacgcttttcaacattctgaccggt
ctgacagcgccgtccggtggtacagcgttgatctttggctatgacgtgagggatcacaac
gacatgcagatgatccgaagtatgactggtgtctgcccacagcacgacattctcttcgat
ctccttacgccaagggaacatctggagtttttcgcagcggttagaggaataccgaggacg
atgatagagatggaggtgaaaaaaacgttgaaagatattgacctgactgaaaaggcggac
gcgtttgcaaaatacttaagtggcgggcagaagcgcaagctgtctgtcgggatcgcgata
attggtgaccctaagataatcattctggacgaacccacagccggcgttgacccatattca
agacgacagatgtggtcctttcttcaatccagacgacacggtaaagtgattcttttaacg
acgcactttatggacgaagcggacatcctcgcggatcgaaaggccgttattagcaaaggg
aaacttcgatgttgcggtagttccctttttctcaagaacaagttcggcattggataccac
ttgacgctggtgctggaaggcaatcctcgggaacacgcgataactcgacttgtgtcttcg
cacgtatcgaaggccgaaaaagcgaggcgacacggccgtgagcttagcttcattctgcct
cataattcggtcgaaaactttgctccattattttcggcaatcgaacaggaaatcaaaaca
aaaaactacaggcttggaattagcagctacggcgtgtcgatgacaacacttgaggaggtt
ttcttgcacttggaaagggacgaggaaactgagtgtacgatggacaatctctcgaaaaaa
atggttagaaatcgagctttgagcagatctttgtctttgcagtcgaaaagtacttcttat
cagagcttgcagaacgaaggtgcagcagttcaagctgacggacaaattaaagctgctggc
gatgtgccagacggagtgcataacgagaagaacccagtagttttgggactgggactggat
cccgttaaaacccggcctaacttttgccaaattctcaaggcaatgttacgattaaggata
ttaagattatttagaaacattcagctactttatttcaccatagttgctcccctggctctc
gttgctcttagcctatacatcaatagcattcaaacggtggacatcagaatgcagtctctg
gaccttaatcctgatacttatggcaaagaaacgagaattctttacacaaacaataccgat
aagaatattaccccattgatgaattatattatcaaagatatcaaagaggttgatgaatat
gatggcagctttgttgacctactacatgtagcgcctcgcatggcagccttcaacatcaat
gattacgatattgcaagtttgaatttgacgatgatgtacaacgatacaatgcagcactct
cttcctattctggtcaacatcatttcaaaggccatgtacagattattaacaggcgacaca
gcagaccctcggcctatacaagtcaaaacgcatccgttccagcaaacttctcaaccgcaa
gaatttaatataggaatcggaagttcagcactcttcattggaatgatattcgtacttatt
cccataatactcgcagtagatatggtatatgatagagagataaaagctaaaaatcaactt
cgagtgaacggcttatcgttctccatgtattttttgacttacttcatcgtattggctgga
cttatggctgtgatcagcctgtgcatccttggaataatatttatattcaacgttccgtcc
ctgcaagagccacccgcgctcataacgttggcagtcttgctaatgctctattgtccctcg
tccattcttttctcgtcatgtcttagctacatctttgacaagatggattcggcgcaaagt
attctgccgaacatagtgacgatcgttgggatggtcccctttcttctggtcatgggactc
gacatgttgggcttaggtggaactgcggcctttgctcttcatgtggtcctttcgctactg
aacacgatgtacgtcccatatgcggccgtctactacgtagaccgcgtccacttaatgtgc
tcaataaacgcggcatgtcatcacttgaccatgtcggactaccttactacagaaatcata
ttaatggctgtcggtgtcatactgcacattccgatttggttcatcattctcgtcatgttg
gacatcaagaaaaccggcgggaacattagtgacgccctgaagtacttcctgcgcaacgga
ggatcgataggggaagaaataatggagaactcggacgttggcgaacacgaagatggcgac
gtgaaggctgagaggcaaagagtattcaatttgatggccgcttccgttcaagaaccacca
gttgtgatggtccagaacttgcgcaaggagtatcgaaatcgagaaattacgccgtgtagc
tgctgcacgaaacgggacgacgaacccgcgccgaagcgaaaagtcgctgtgcgaaatctt
tcgcttgccgtcgaaccgggcgaggtatttggtctcttgggacacaacggcgctggaaaa
actaccacgatgaagatcataattgccgaggaggctgcgactcgggggcgagtccaaatt
ggaggtaataacataacgtcccaaataaccgaggcctttcgacaaatgggctactgcccg
cagcacgacgctcagtggaagaacattactgttagagaacatctcgagtgttacgctgcc
atacgaggtgtgcccccgagtgaaattggcaggatcgtcgacctgtacttgtcaggtctt
caaattcacgagcacgctgataaacaatcgcaagagtgctcagggggtaccagaaggaaa
ttgagcttcgccatggcaatggttggaggtccgaaagtcgtgcttatggacgagcccagc
accgggatggatccccgctcgaagaggtttctctgggacacaatcctcgccagcttccag
gtttcggttgcacaggggggcaggggggcgatcctcaccacccactcgatggaggaggcc
gacgccctgtgctccagagtgggtatcatggtcaagggcgagctgaggtgcataggctcc
acccagcacctcaagaatctgtacggagccgggtacaccctggaaatgaaattgttgggg
ggcgattgcaccccaacgacaccatccggggaccggatatctggactgaaggaatttgtc
gcaggtcttttcccagacgccactctcgaggaaagttttgccgacaggctggtgtttggt
gttccgcagcatgcggtgcagtcgctggctgaatgcttcacgcagcttgaaaaggcaaaa
atggaattggacatcgaagaatacagcttcagtcagacgaccctcgagcaagtgtttctt
aaattttctcactatgatgaagtgaacgggggcgaataa
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integrated database retrieval system
