Neodiprion virginianus: 124298027
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Entry
124298027 CDS
T09046
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
nvg
Neodiprion virginianus
Pathway
nvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124298027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124298027
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
124298027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
124298027
NCBI-ProteinID:
XP_046605534
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All DBs
Position
2:complement(24784673..24793283)
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AA seq
540 aa
AA seq
DB search
MSSTAVTKPGAVPSVQEYSIRVPKNSKKKHNVMRFNATLNVDFSKWSQVKMERENNMKEY
KGMDEEMPKFGAGSEFGRDAREEARRKKFGITSRKYKPEDQPWILKSGGKTGKKFKGIRE
GGVSENAAYYVFTHAPDGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNRVINYFS
LMMRKRMRNDDEGAEDDPELSEGGKGKKLGKKEKELKISEMDEWMDSDDDDSSSDEDKEK
KNSEEEEDDKKKKKKAKEEAQKKKKKKKKGSDDEAFEESDDGDEEGRECDYISDSSDSES
ELEQQKEIKSVAEEDALRKLLASDEDSQGEENEEEKKDGEDDKDDDEDNKDKDEKEKDNK
LNKESDKKKDKKKKKKQSKKKDVKKSGIGKDSSSDFSSDSGSDSDIPREKDSKKPNSAQS
SRSVTPVLPGVSADCFKRKQSGSPDLSQSKKIKLDNFNSAPVTSYFPGASESGITEDAVR
RYLMRKPMTTTELLQKFKSKKTGLTSEQLVNVMTQILKKINPVKQTIKNKMYLSIKAQHN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacagctgtgacgaagcctggcgcagtaccttcggtacaagaatacagcatc
agagttccaaagaacagtaaaaaaaagcacaatgtcatgcgatttaatgcaacactcaat
gttgacttttcaaaatggtcgcaagtcaagatggagcgtgaaaataacatgaaagagtat
aaaggaatggatgaggagatgccaaagtttggagcaggatccgagtttggtcgcgacgca
agagaagaagcaaggcgaaaaaagtttggaataacaagtagaaaatacaaaccagaagat
cagccttggattcttaaatcaggaggtaaaacaggcaagaagttcaaaggaattcgagag
ggtggagtcagtgagaatgcagcatactatgttttcactcatgcacccgatggtgccatt
gaagcatttcctttgcatgaatggtataatttccagccaatacaaagatataaagctttg
agtgctgaagaagctgagcaagagtttagtaggcggaatagagtcattaattacttttca
ttaatgatgcgaaagagaatgcgaaacgacgacgaaggcgccgaagatgatccagaatta
tctgaaggtggtaaaggaaaaaaacttggtaaaaaagaaaaggaattgaaaatatcagaa
atggatgaatggatggatagtgacgatgatgattcgagttctgacgaagacaaggagaaa
aagaattctgaagaagaagaggatgataaaaaaaagaaaaaaaaagctaaggaggaagca
caaaaaaagaagaaaaagaagaagaaggggtcggatgacgaagcatttgaagaaagtgac
gatggagatgaagaggggagagagtgtgattatatatctgactcttcagattctgaatca
gaattggaacaacaaaaggaaataaaatctgtggctgaagaagatgctctacgaaagctt
cttgcttcagatgaggatagtcaaggggaggagaatgaggaggaaaagaaggatggagaa
gatgacaaagatgatgatgaggacaacaaagacaaagatgagaaggaaaaagacaacaaa
ctcaataaggagtccgataaaaaaaaagataagaagaaaaaaaagaagcaatcaaaaaaa
aaagacgtaaaaaaatctggaattggaaaagattcatcaagtgacttctcaagtgattct
ggatccgactctgacatacctagagaaaaagacagtaaaaaaccaaatagtgcacagagt
tcaaggtctgtgactcctgtccttcctggagtctcagctgattgttttaaacgaaaacaa
tcaggctcaccagatctgtcacagtcgaaaaaaatcaaattagataatttcaactctgcc
ccagtgacatcatactttccgggagccagtgagtctggtataacggaggatgctgtcaga
cgttatctgatgcgcaaaccaatgacaaccactgagcttctacagaaattcaagtccaag
aaaacgggtttgacctcagagcaattggttaacgtcatgacacagatattgaagaaaata
aatcctgttaaacaaactattaaaaataaaatgtatctgtcaattaaggcacaacataat
tga
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