Neodiprion virginianus: 124298043
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Entry
124298043 CDS
T09046
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
nvg
Neodiprion virginianus
Pathway
nvg03018
RNA degradation
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124298043
09123 Folding, sorting and degradation
03018 RNA degradation
124298043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124298043
03041 Spliceosome [BR:
nvg03041
]
124298043
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124298043
mRNA degradation factors
5'-3' decay
Lsm complex
124298043
Spliceosome [BR:
nvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124298043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
124298043
NCBI-ProteinID:
XP_046605557
LinkDB
All DBs
Position
2:complement(24813541..24815005)
Genome browser
AA seq
96 aa
AA seq
DB search
MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSVTQGVEQVVLGLH
IIRGDNVAIVGELDDEMDARIDLSAIRAEPLSSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggacttgaaagttacgtaaaccatactgtttcaataataacttccgacggt
aggaactttatcggtacattgaaaggatttgatcagacaatcaatttgattctcgatgaa
tcacatgagcgtgtgtacagcgtgacgcaaggtgtcgaacaagttgtattaggtcttcat
attatcagaggagataacgtagcaattgttggtgagctagacgatgagatggatgcaaga
attgatctttcagcgatccgagctgaaccacttagctctgtagcgcattaa
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