Neodiprion virginianus: 124298291
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Entry
124298291 CDS
T09046
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvg03009
]
124298291
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124298291
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
124298291
NCBI-ProteinID:
XP_046606050
LinkDB
All DBs
Position
2:complement(6091715..6103344)
Genome browser
AA seq
2775 aa
AA seq
DB search
MKNKPTRHKESNTFKFKPFSERIADIDVDVFHRVSHRNEAESDEVETHFYQCLHKWSVLN
LTENYTNLKKELRGIVTLPQLLNSKEHVIDALLKYLRLKDTLCLQPILELVIAAARDLQK
EFYEYFPQFLTVIIDLLHTNDAEQLEYTFTALAYLFKFLWRYLIKNVDAVFDLLLPLLAE
SKPTYINDFAAESFAFVVRKVKDKDAFLELLINALEKRPDGVSGCGKLLFQVIQGTTGQF
HSCAEQMLTLYIGSLKNESIDKQMLYSILQQVVQCLVNSIHPQKSEIFWNVSLRLADLFL
ENYEKSSGDTDELKTEKENALFLLHSLLLEAVNHRDGRMLVHPNQLINELVKALDFFENK
ETTVGGDKVIVKGLAKLSGSVLLAQNVKLTQEYSNKLVRKILAIRDIEILLSVVEQLISY
SSFETLVLPHFMTYSFQTGFNSDILRLFSKIITVKSPLCLNGTKLKEWTRYNLNIRNIPG
ESLNHMQNILTALNDNAPTEDSLRLLITLPHLSPVPKICEETLLEATKNIYGKLKTFVDI
NSDLKLDLLSFTFLLAIESVAHILQPNEFYEYITKHDINLSILIDKYSTVRSILCAVDLC
LSHIVDSEIGNNLINIDLFNSLNESLAPLLGSPYHKDRLVIAHIYSLFSNVKDILATNDQ
GDKNFLALPYLAEAEPSTVHCYRDKLLPLQGLAFERILLSNFDSKYLKFPIYCLFGNLYV
NFSLLWDPIMKLIASYAHKQCDSFWPIFISKLESAKTQGESETTSLLTFDCDVTSTLLFQ
VFDNEDKPDYNNYSLLLWKCMSLFSDFCEMKNRDLTGIFIDFVESNFFKSNSEDAKSWSI
KKHEGDNELANQIVQETEDDDEIEHEKATKNDLATNKISFDGKHKIKLLLAQMEIFSKVK
NPRTLYREADMYKIYLELLASKNSEVQKSALNCLFTYKHKYLVPYKEHLYNLIDEKSLKN
ELALFKIDKESNMIQDDHREALLPILMRIIYAKMVMRTGMRTGGKAGGLVRRTIVLRFLA
GTQEDEMMTFISMAFKLFHKYVPIASEEELNLNEMVRDVVNNLDLSNIIPPKRLQSSVNL
LAIVIEQFGGKMSSKLLPRLLGILICILAQVTGISHRSNDVHPGYMSSIRNLRTSCMNIL
SRFFSHYESYEWTESEIDALFAVAVFPWLEKLPIEGIHSPTALLKLFIAWSQNPRYYPLF
AKHFENNLTLTPLPYVIQLLLGPKTHGSVINAILEMIEKMLTLQDYGVIDNNVNQMDVDA
KFFPIILINNMLEVKQNSTRCRTDNINYGSALLLPHVPNILEYIKKKLNKSNKGVNKIEL
VVLSRISEFVEDSETCDTLLTLLLPILVKKATTGASEEIVVQLVSTIFNLMKIVEHPEKH
LRLIVPLTGAITAVSARKSLMRLYNIISEGSSEQHRDLMIRNCKLLVELNAWDSKWIDQP
DFDKRLEAFKEVNTLLEEDALTLEFGATIIYNCFFFLKTEKDLALRDLSGQCLKTIAPKL
VRKYKDRHLEKNYLIDETILSIVRMGIRDKNEIVRNQSIALLGQLAMECSDVHPVLRDLH
PLSNKADPEVDVFENLQHLQLHRKARALLKFCSIAKTWTRSPNPKTLTQFILPLASSYLC
SESFVNKNSIVDAAIETVGTVCRLLPWHQYEVVLKYYLDKLRSSVEFQKQTIRIVVAILD
AFHYNLSKYKEPASSVIAIVNTEDVKEPDPLPSYDEGSVLDGIPDMDEKLDESLADDAKN
LDESEPKSGNNSQINIPAMQRELFLSQFAARRLVFGISKVLLPQLNRSIMARTQHENSHK
VNRKKTGFEREEEEIMRVPIALAVVKLLQKLPPGVLEENLPGILMKLCTFLKSRLDSVRR
ITRETMQKIMITLGPEYLRHLLKEMNNILTKGFQVHVLVYTIHAVLVSLKPYYKPLHINE
NLHSILSVCKVDLFGLTGEEKEIAGIVKNVSEAKSTKSFDIFHILAQFITESCLLDLVMP
LKNALIKTHSYKIIRKVVECLRQVVLGLADNTFIEINKMLTFLYGVISESIPDLLLATKP
KQVTEREAEIKARQKPDCLIIAPEPKNRMGVKAQAKTSSNANAHIMVEFGLRLYHILLKR
DRISAPELKSYLDPVVSILSDCLKSQHVKLTTLALQCLNWILKTDLPSVKTYITEICSSM
FNILHKYAAAGLSKGDNFDLVTAAFKCMSVLVRDVKDFTINSEQLKILILYAEQDLHDYD
KQGTAFTLLRAILSRKLIVPEMHDVMEKVAKLSVTSELDHVRQQARSIFHIFLMEYPLGK
FLEKHLSFYLTQLSYEVKSGRLSALEMIHGIITGFPLTVLSQHSGLFFLMIGARLANDED
PDCRKLCAKCIKEMIIRLPHNDKNKLFDIILLWLKEVKVSHRRLAAQLCGIFITVEKQEF
ESRLAKLLPLVLKQFNDTDSDDSEPGRFVRIKKQDISNSDDFRKDKKKLGDSERMRDHHL
FQVLQMFLKLSSNCPSFLKDEKYEDAVCILAAHSQSLLAHPHLWVRLAAAQLIGFILAAI
DVEKVADALENPESYADQKGYIYSDPVATMKSLALDLAAQLQPELVFEDLADQVVKNLIF
VARALKSFHIRGGKKPDNHSSTSESDGDRISLFWLVKRMRKIVNVEVTQSPKSTAMRTAV
FKWTAGVVATISVENLNPVLFHLMSPLVREMTTTEESNAPLRHLAKDVATMIKKSLGSEE
YMKLLSKVQQKLDTKRAEQKKSRTQEFITDPELAAKRKIARQQKKKEAKKRKMETMKGRK
SFGKKPRREVNFDAS
NT seq
8328 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaccgacccgtcataaggaatcaaacacctttaagtttaagcccttctcg
gagcgcatagctgacatagatgttgatgtatttcatcgggtatcccatcgcaatgaggcg
gaaagtgatgaggtggaaacacatttttaccaatgtctccacaaatggagcgttcttaac
ctcacagagaattatacaaatttgaaaaaagaacttcgcggcattgtcacgctgccacaa
ctgttgaacagcaaagaacacgttatcgatgctcttttgaaatatctcagattgaaggat
actctgtgtctacagccgatactcgaattagtaatcgctgctgcacgagatcttcaaaaa
gaattctatgagtactttcctcaattcttgacggtgataatagatttgctacatacaaac
gatgctgagcagctggaatatactttcacagcattggcttacctatttaaattcttgtgg
cggtacttgatcaagaatgtcgatgctgtgtttgatctgttgttaccattactggctgag
tcaaaaccaacttacatcaatgattttgctgccgaaagttttgcatttgtagtaaggaaa
gtcaaagataaggatgcatttttagaactgctaatcaatgctttggaaaaaagaccagat
ggagtatcagggtgcggaaaactattatttcaagtcatccaaggaacgactggtcagttt
cattcctgcgctgaacaaatgttgacgctttacattggcagcctaaaaaatgagtccata
gataagcaaatgttatacagcattcttcaacaagttgtacagtgcttagtcaactccata
catccacaaaaaagtgagattttttggaatgtttctcttcgattggcggatctgttttta
gagaactatgaaaaatcaagtggagatacggatgaattaaaaacggaaaaagagaatgca
ctattcctactccatagtttattgttagaagccgttaatcatagagatggacgaatgctt
gttcatcccaatcaattgataaacgagctggtcaaagcactcgatttctttgaaaataag
gaaacgactgtaggtggtgacaaagtaatcgtgaagggcttggctaaactttctggatca
gttcttttggctcaaaacgtaaaacttactcaggagtattcgaataaacttgtacgaaag
atattggccatacgagatattgagattttgctttcagtagtggaacaactaatttcttat
tcgtcattcgaaacattggtattaccacatttcatgacctacagttttcagactggcttc
aacagcgatattttgcgacttttttctaaaataatcactgtcaaatcacctctttgtctt
aatggtacaaaattgaaagaatggaccagatacaatttgaatatccgtaatattccaggt
gaaagtttaaatcatatgcaaaatattttaacagctctgaatgataatgcaccgacagaa
gattcactgcgattgttgataacgttacctcacttgagccctgtgccgaagatttgtgaa
gaaacattgttagaagctacaaaaaatatttatggaaagttgaaaacattcgtcgatatt
aattcagacctgaagcttgacttgttaagtttcactttcctcttagcgattgaatctgtt
gcacacattctacagccaaacgaattttatgagtatattactaaacatgacataaatttg
tctatactgatagataagtattcgacggtgagaagtatactttgtgctgtggatttgtgc
ttgtcgcacattgtcgattcagaaattggcaataatctgataaatatagatctgtttaat
tcactaaatgaaagtttggcaccattattaggatctccgtaccataaagacagacttgtg
atagcccacatttattctttgttcagtaatgttaaagatattttggccacgaatgatcaa
ggtgataaaaacttcttggcattaccatatttagctgaggctgagccgtcaacagtccat
tgttatagagataaattgctacctctgcaaggtcttgcgtttgaaagaattctactaagt
aactttgattcaaagtatttgaaatttcctatatattgtctgtttggaaatttgtatgta
aatttttcattgctatgggatccaataatgaaattaattgcatcgtacgcgcacaagcaa
tgcgattcattttggccaatatttatatcaaaattggaaagtgccaagacacaaggcgaa
tcggaaaccaccagtttgctcacgtttgattgtgacgttacttccacgctcttgtttcaa
gtttttgataatgaggacaaacctgattacaataactacagtttacttctttggaagtgt
atgtcattattttctgacttttgtgaaatgaaaaatagggatttgactggaatattcatt
gatttcgttgagagtaactttttcaaatccaacagcgaagatgctaaatcttggagtatt
aagaaacatgaaggtgataatgaattggcaaatcaaattgtccaggaaactgaagatgat
gatgaaatagagcatgagaaagccaccaaaaatgatttagcaacgaataaaatatcgttt
gacggtaaacataaaatcaagcttctcttggcacagatggaaatattttcaaaggtaaaa
aatccaagaactttgtaccgagaagccgatatgtataaaatttatttagaattacttgcc
tccaaaaatagtgaagttcagaaatctgctctaaactgtctgttcacttacaaacacaag
tacctggtaccgtacaaggagcatctatataatctaatagatgaaaaaagtttgaagaat
gagttagctttgtttaaaatagataaagaaagtaacatgatacaagacgatcacagagaa
gcattgctgccgattcttatgaggataatatatgctaaaatggtgatgaggacaggaatg
agaaccggaggaaaggctggtggtcttgttagaagaactattgtactacgatttctggct
ggaactcaagaagacgagatgatgacattcattagcatggcctttaagctttttcataaa
tatgtaccgatagcttccgaagaagaactcaatttgaatgaaatggtgagagatgtggtt
aataatctagatctatccaacatcattccaccaaaacgactacaaagctccgtgaattta
ctggcaattgtaatcgaacaatttggtggcaaaatgtcgagtaaattgctacctcgtttg
ttggggatactaatttgtatactagcacaagtaactggaatatcacaccgttcgaacgac
gttcatcccggatacatgtcttcgataagaaatctgcgtaccagttgtatgaacatacta
tctaggttcttttctcattatgaaagctacgaatggactgaaagtgaaatagatgcgctg
tttgctgtagcagtgtttccatggctcgaaaagttaccaatcgaaggtatccacagtcca
acggcactcttgaaactcttcatagcttggagccagaatccaaggtactatcccttgttc
gcaaaacatttcgaaaataatttgacgctgacaccgctgccatatgttatacaattattg
ttggggcctaaaacgcacggttctgtgataaacgcgatattggaaatgattgagaaaatg
ctgacgctgcaggattacggtgtaattgataataatgtgaatcaaatggacgtcgacgca
aagtttttcccaataatattgatcaataatatgctggaagtcaagcaaaatagcacccgt
tgtcgcacagataatatcaattacggatcagctctgctactgcctcacgtaccgaatata
ttagaatatataaaaaagaagttaaacaagagtaacaagggagtgaacaaaatcgaactg
gttgtattatcgcgtatatccgaatttgttgaagactccgaaacatgcgatactctgttg
acattgcttctgccaattcttgttaaaaaagcgacaactggtgcaagtgaagagattgtc
gttcagctggtttccaccatctttaatcttatgaagatcgttgaacacccagagaagcac
ttacgacttattgttccgcttaccggtgcgattacagctgtatcagctagaaaatccttg
atgcgattgtacaatattatatcagaaggatcgtcggaacaacaccgtgatcttatgata
cgcaactgtaaactgcttgtcgagttgaacgcctgggacagtaaatggatcgatcaacca
gattttgataaaaggctagaggcgttcaaggaagtaaacacgttactggaggaagatgct
ctcacacttgagtttggcgcgacaataatatacaattgctttttctttttgaaaactgag
aaagatctagcactgagagatttgtcagggcagtgtttaaaaacaattgctccgaagttg
gtcagaaagtacaaggacaggcacttagaaaagaattatctaatcgatgaaaccattttg
tcaattgtgcggatgggcattcgggataaaaatgaaattgtacgcaatcagtctattgct
cttctgggccaattagcaatggaatgttccgatgttcatccagtgctccgagatcttcat
ccgctgagtaataaggctgatccagaagtggacgtttttgaaaacttgcaacacttgcaa
ttacacagaaaagcacgagcactgctcaagttttgctccattgcaaaaacctggacgaga
tctccaaatccaaaaacattgacgcaatttatactacctcttgcgtcgtcctacttgtgc
tctgaatcttttgtaaataaaaatagtatcgttgacgctgcgatcgaaacagtcggcact
gtgtgtagactgttaccctggcatcagtacgaagttgtcctcaaatactatctagataaa
ttgagatcttcagttgaatttcaaaaacaaacaataagaattgttgttgcgatactagat
gcgttccattacaatctttcaaagtacaaggaacccgcaagctctgtaatcgctatagtg
aatacagaggatgtgaaagagccggatccattacccagttacgacgagggtagtgtgctt
gatggcattccggatatggatgaaaagttggacgaatcattggcggatgatgcgaaaaat
cttgatgaatcggagccgaaaagtggcaataattcacagataaatataccagcaatgcaa
agagagctgtttctttcacaatttgctgccagaagactagtattcggcatatcgaaggtc
ttgttgcctcagttaaatcggtcaatcatggcacgcacgcaacacgagaacagccacaag
gtaaacaggaaaaagactggcttcgaaagggaggaagaagaaattatgcgagtgccaatt
gcgcttgctgttgttaaactacttcaaaagttaccgccaggtgtactggaggaaaattta
cctggcatcctgatgaagttgtgcacatttcttaagtctcggttggactctgtcagacgt
attacacgtgaaactatgcaaaaaataatgataactttggggcctgaatatctgcgtcat
ttactcaaagagatgaacaacatattgacaaagggttttcaagtacacgttcttgtgtat
accattcatgctgtacttgtttcgttgaaaccatactacaaacctcttcatattaacgag
aatttgcacagcattttatcggtatgcaaggttgatctgtttggcctaactggagaagaa
aaagagatcgctggtattgtaaagaatgtttccgaagcgaagtcaactaaaagttttgac
atctttcatatattagctcaatttataaccgaatcatgcttactcgatctggttatgcca
ttgaagaatgcattaatcaaaacacactcctacaaaattatccgtaaagtagtcgagtgc
ttgagacaggtagttttgggtctggctgataatactttcattgaaataaacaaaatgcta
acatttctctatggcgttatatctgaaagtatacctgatctcttgcttgcaactaaacct
aaacaagtaactgaaagagaagctgaaataaaggcacgccaaaagcctgactgtttgatc
atcgcacctgaaccaaagaatagaatgggtgtaaaagcccaggcgaaaacttctagcaat
gccaatgctcacattatggtggagtttggcctacgactgtaccatattctgttgaaacga
gatcgcatatcagcgccggaactgaaatcctacttggaccctgtcgtatccatattaagt
gattgtttaaagtctcagcacgtcaagctgactacgcttgcccttcaatgcctgaattgg
atcctaaaaacagatcttccatcggtaaagacttacattacagaaatttgttcttcgatg
ttcaatatactgcacaaatatgctgctgctggattaagcaaaggagacaacttcgatctt
gtaacggcagcgtttaagtgcatgtctgtgcttgtacgagatgtgaaagactttacaata
aattcagaacagttgaaaatacttattctctacgctgaacaagatttacacgattacgat
aagcaaggaactgcgtttactttactcagggctatactaagtcgaaaattaattgtccct
gagatgcacgatgtaatggagaaagttgccaagctgagtgtaacgtcagaattagaccat
gtccggcaacaagcacgttctatatttcatatattcctcatggaatatccactaggaaag
ttcctcgaaaaacatctttccttttacctaacgcagttgagttatgaagtaaagtcagga
agactaagcgcgttggaaatgatacatggcattatcacaggatttccactgacggttcta
tcgcaacactccggtttgttctttttgatgatcggtgcaagactagcgaatgacgaagat
ccggattgcagaaaactctgtgccaaatgtatcaaggaaatgattattcgactaccgcat
aacgataagaacaaattatttgatatcatactcctgtggttaaaggaagttaaggtttcc
catagacgactagcagcacagctttgtggtattttcattaccgtggagaaacaggaattt
gaatcacgtcttgccaagctgcttccacttgtactgaaacagtttaatgatactgactct
gatgattcagaaccaggtcgatttgtgaggataaaaaaacaggacatttcaaattcagac
gattttcgaaaggataaaaagaaacttggcgattcagaacgaatgagagaccaccacttg
ttccaagttttacagatgttcttaaaattatcatccaattgtcctagttttttgaaagat
gaaaaatacgaagatgccgtgtgcatattagctgcacacagccaatcgttactggcacat
cctcatctgtgggttcgtttagcagcagctcagctaattggatttattttggctgctatt
gacgttgaaaaagtagctgatgctcttgaaaacccagagagttatgctgatcagaaaggc
tacatttattcggacccagttgctacaatgaaaagcttagctctggacttggctgcacag
ttgcaaccagaacttgtatttgaagatctagctgatcaggtggtgaaaaacctaatattt
gttgctcgagctttaaaatcttttcacattagaggcgggaaaaaacctgacaatcattct
tccacctcagaaagtgatggcgacagaatatcacttttttggcttgtcaagagaatgcga
aaaattgtaaatgtggaagttactcagtcacccaaatctaccgccatgagaactgcagta
ttcaagtggaccgcaggggtagtagcaactatatctgtggaaaatttgaatccagtattg
tttcatttgatgtcaccgctggttagagaaatgaccacaactgaggaaagcaatgctcca
ttacgtcatttggctaaagacgttgcaacaatgataaagaaaagtttaggaagtgaagag
tatatgaaactattgagcaaagttcaacaaaaattggacaccaaaagagctgagcaaaag
aaatcgcgaacacaagaatttattacggacccggaattagccgccaagcgaaaaattgca
agacagcaaaagaaaaaggaggcaaaaaaacggaaaatggaaactatgaagggtcggaaa
tcgtttggaaaaaaaccacgaagggaagtcaattttgatgcttcgtag
DBGET
integrated database retrieval system
