Neodiprion virginianus: 124298428
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Entry
124298428 CDS
T09046
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124298428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124298428
03009 Ribosome biogenesis [BR:
nvg03009
]
124298428
Enzymes [BR:
nvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124298428
Spliceosome [BR:
nvg03041
]
Complex A
U1 snRNP components
U1 related factors
124298428
Complex B
124298428
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
124298428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Imm64
Motif
Other DBs
NCBI-GeneID:
124298428
NCBI-ProteinID:
XP_046606362
LinkDB
All DBs
Position
2:complement(29164021..29167004)
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AA seq
325 aa
AA seq
DB search
MEGIRRQGYAQPTAIQAQGWPIALGGKDLVAIAQTGSGKTLGYILPAIVHIINQPRLNSG
DGPIALILAPTRELAQQIQEVANCFGETASVRNTCVFGGAPKGPQAHDLERGVEICIATP
GRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRRIIEQIRPDRQVLMWSATWPKE
VRALAEDFLSNYTHLNIGSLTLSANHNIIQIVDVCQEFEKDMKLFRLLQEIGTEKENKTI
IFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFRSGRAPILVATDVAARGL
GLGNPKCHRIENHAINHFDVIQWKY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaagggatccgcaggcagggttacgcacagcctaccgctattcaagcacaggggtgg
cctattgcgcttggtggaaaagatctagtcgctatagcacaaactggatctgggaaaaca
ctcggctacatactgccagctatagtgcacatcataaatcaacctcggctgaacagtggt
gatggtcctattgctctgatactggcccccaccagagaactggctcaacagattcaagaa
gttgcaaattgctttggagaaacagcctctgtaaggaacacatgtgtctttggtggggca
cctaagggcccacaggctcatgaccttgaaagaggcgtagaaatctgtatagcaacgcca
ggaagacttattgactttctagaaaaaggcacaaccaatcttcgcagatgcacatatctc
gttttggatgaagccgatagaatgctcgatatgggttttgagccccagattcgcagaatc
attgaacaaattaggcctgatcgtcaagttttgatgtggtcagcaacatggccaaaggaa
gtacgggcgctagcggaagatttcttgtccaattatacgcacctcaatatcggatctttg
acattgtcggcaaaccacaacatcattcaaatagtggacgtttgtcaggagtttgaaaaa
gatatgaagttattcaggcttctccaagaaattggcacggaaaaagaaaataaaactata
atatttgtggagacgaagagaaaggtagacgatatcacacgaaatatcaggcgagatggc
tggcaagctctaagtattcatggagataaaaatcaacaagagagagatcatgtcttgcaa
gaatttcgtagtggaagggcaccgattttagttgccactgacgtagcagcccgtgggtta
ggccttggcaacccaaagtgccatagaattgaaaatcacgcaattaatcattttgatgtt
atccaatggaaatattga
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