Neodiprion virginianus: 124298585
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Entry
124298585 CDS
T09046
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
nvg
Neodiprion virginianus
Pathway
nvg03082
ATP-dependent chromatin remodeling
nvg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124298585
03083 Polycomb repressive complex
124298585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvg03036
]
124298585
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
124298585
Histone modification proteins
HAT complexes
HATB complex
124298585
HDAC complexes
Sin3A-HDAC complex
124298585
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
124298585
PRC2.2
124298585
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
124298585
Heterochromatin formation proteins
Other heterochromatin formation proteins
124298585
Chromatin remodeling factors
NuRD complex
124298585
NuRF complex
124298585
NuRF complex (fruit fly)
124298585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
124298585
NCBI-ProteinID:
XP_046606768
LinkDB
All DBs
Position
1:complement(21959135..21965413)
Genome browser
AA seq
427 aa
AA seq
DB search
MGDKDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKTIFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEGGAS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaaagacggagaaacatttgacgatgcggttgaggaacgtgtcatcaatgaa
gagtacaaaatatggaagaaaaatactccctttctgtacgatcttgtaatgactcatgcc
ctggagtggccctcccttacagctcaatggttgcctgatgttacaagaccagaagggaaa
gattattctgtgcaccgtcttattttgggtactcatacttccgatgaacaaaaccacttg
ctaattgccagcgtacagttacccaatgaggatgcacagttcgatgcttctcattacgac
aatgagaagggagagtttggaggatttggatctgtcagtggaaaaattgaaatcgagata
aaaatcaatcacgaaggtgaagtcaacagggcacgttacatgccgcaaaatccatgcgtc
attgctacaaaaactccctccagtgacgtactagtatttgactataccaagcatcccagc
aaacccgatccaaacggtgaatgccatccagatctcaggttgcgtggacatcaaaaagaa
ggatacggcttgtcgtggaatccaaacctgaacggctacttgttgagcgcatctgacgat
cacactatatgcttgtgggacatcaatgcaacacctaaagagcatagagtaatcgatgcc
aagactatattcactggtcacacagctgtggtggaagatgtcgcttggcatttgctgcac
gagtccttgtttggatcagtagctgatgaccaaaaacttatgatttgggatacaagatgt
aataacacaagtaagccgagccatactgtggatgctcatacagcagaagtaaactgtctg
agtttcaacccttactcggaatttatattagccacaggcagtgctgacaagacggtagct
ctgtgggatctgagaaatttgaagttgaagcttcactcattcgagtcccataaagacgaa
attttccaagtacaatggtcaccgcacaatgagacaattttggctagcagcggaaccgac
agacgcttacatgtttgggatctgagtaagatcggagaagaacagtccactgaagatgcc
gaagatggaccacccgaattactgttcattcatggtggacatacagccaaaataagtgac
ttctcttggaaccccaatgagccatgggttatttgttctgtgtcagaagacaacataatg
caagtttggcaaatggctgagaacatttacaatgacgaagaaccagatacgcctgcaagt
gagcttgagggtggagcgtcataa
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integrated database retrieval system
