Neodiprion virginianus: 124298625
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Entry
124298625 CDS
T09046
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nvg
Neodiprion virginianus
Pathway
nvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124298625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124298625
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124298625
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124298625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
Spectrin_Anc-1
PulA_N1
Motif
Other DBs
NCBI-GeneID:
124298625
NCBI-ProteinID:
XP_046606805
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Position
2:complement(2044045..2050960)
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AA seq
709 aa
AA seq
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MWILNKIPFNILYLLKKEILITSFCTNNVGVKMREMKGEIDRCLKKVTEGVETFEDIWQK
VHNATNSNQKEKYEADLKKEIKKLQRLRDQIKSWIASGEIKDKSTLLDYRKLIETQMERF
KVVERETKTKAYSKEGLGAAQKLDPAQKEREEVSNWLANSIDALNLQLDTFESEIESLLA
GKKKRLDKDKQDRMDELKAKLEKHRYHIRKLETLLRMLDNMSVEVDTIKRIKDDVEYYIE
SSQEPDFEENEYIYDDIIGLDEVELSGVGIPSSATTDSNNSNETGGTPTSTNSGTSPIPS
PPLSSTMHNHSSDSSTDMDKKTKPVKPTAVRPLLNSQGSIPTTGSTTVIKMSLLSSSTPS
KPIPMTSSHSSPSATINHIATSNAGNFATVAASHINSQVIHSTSSKTSSHGSENGLLSSS
STSSVASNVPPTIMQQHNNPPPLQPSHILLNQQSQNHNSETEMTTPIPSSSSPPSPVSSR
SSPLPANSCSPVPSATNGLISKIPDGMSSLKSIAQQVIVRAGIEIPPSEPTRNLFDTTKV
SNATSEAHIPPLLGVAPLGPVPLQKEHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNLCK
TPPYYQQVQLPHSDTVEFFQRLSTETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMM
WFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttaaacaaaataccatttaatatcctttatttattaaagaaagaaatactt
atcacttctttttgcaccaacaatgtaggagttaagatgagagaaatgaaaggtgaaata
gacaggtgccttaaaaaagtgacggagggcgtagagacgtttgaggacatttggcaaaaa
gtccacaatgccactaacagcaaccagaaggagaagtacgaagctgatctcaagaaggag
atcaaaaagcttcaaaggttacgtgaccaaatcaagagctggattgcatctggagaaatt
aaggacaaaagtaccctccttgattatcgaaagctaatcgaaactcaaatggagaggttc
aaagtcgtagaaagggaaacaaagactaaggcttattctaaggaaggcctaggagctgcc
caaaaacttgacccggcgcaaaaggaaagagaagaagtcagtaactggctagctaattcg
atagatgcgctcaatttgcagctggatacatttgaatctgaaatagagtcattgcttgcc
ggaaagaaaaaaaggctagacaaagataagcaggatagaatggatgaactcaaagcaaag
cttgaaaaacaccgataccacattcgcaagctggagacgttgttgcgcatgttggataat
atgtctgtcgaggttgacacgatcaagaggataaaggatgatgtcgagtattatatcgaa
tcttcccaagagccagactttgaggagaatgagtacatttatgacgacattattggactg
gacgaagtcgagttatctggtgttggtataccatcgtcagcaacgactgatagtaacaac
agtaacgaaaccggaggcactccaacgtccactaattcaggaacatcgcccataccgtca
cctcctctaagttccaccatgcacaatcattcgagtgatagttccacagatatggataag
aaaacaaagcccgtgaaaccgacggcagtgagacctttacttaattcccaaggaagtatt
ccaacaacaggaagcactactgtaataaagatgagtttgttgtcgagcagtacgccgagc
aaacccattcccatgacatctagccatagctcgcctagcgccacaattaaccacattgca
acgtcaaatgctggaaactttgcaactgttgctgcgtcgcacataaactctcaagtcatc
cattctacctctagtaaaacatcatctcacggaagtgaaaatgggctgttatcatcatca
tcaacatcaagcgtagcgtcgaacgtacctccaacaattatgcagcagcacaataatcca
ccgccgcttcagccgtctcatatactgctaaatcaacagagtcagaatcacaacagcgaa
acggaaatgacaacaccaattccctcgtcatcgtctccgccttcgcctgtcagcagtcga
tcttcgccattgcctgcaaattcctgttcgccggtaccatctgccaccaacggtctcatc
tctaaaattcccgacggcatgtcctcgctaaaatccattgcccaacaagttattgtcaga
gcaggtattgagatacctccgtcggagccaaccaggaacctctttgacactacgaaggtg
tcgaatgctacttcggaagcacacattccgccgctgctcggggtggcgccgctgggaccg
gtgcctctccaaaaagagcaccaacttcaattccaaatgatggaagcagcttactatcac
atgcctcatccttcagactctgaacgactcagatcgtatttgccccgcaacttgtgcaaa
acgccgccctactaccaacaagtacaacttccacattctgatacagtggaatttttccag
cgactatcaacagagacgctgttcttcatattttactatatggaaggatctaagggacag
tacttggcagctaaagcccttaagaaacaaagctggaggttccatacgaaatacatgatg
tggttccaaaggcacgaagagcccaaagttatcaacgaggaatacgaacagggaacgtac
atatatttcgactacgaaaaatgggggcaacgcaaaaaagaaggcttcacttttgagtac
aagtacttagaggacagggaccttaactaa
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