Neodiprion virginianus: 124298688
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Entry
124298688 CDS
T09046
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
nvg
Neodiprion virginianus
Pathway
nvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124298688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124298688
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124298688
mRNA degradation factors
5'-3' decay
Decapping complex
124298688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
ELFV_dehydrog_N
Beta-prop_TEP1_2nd
WDR55
DUF2252
Motif
Other DBs
NCBI-GeneID:
124298688
NCBI-ProteinID:
XP_046607001
LinkDB
All DBs
Position
2:complement(30966678..30973130)
Genome browser
AA seq
1097 aa
AA seq
DB search
MHMCNGDSSMTGKMIKPTDESVRPYQYPQTVEFNGQEDQHSVELFSTDVTIVPSPGGHDH
GSSKVKLKNIVDFTWELRFYTGQLLAVHMSGKYLAYGIKAGTGGGVVRVVYKEREQRALL
RGMRGAIQDLAFAHISNAILACVDHSGSLFVYSIESTHLKLVCNLVLQVDADDASPTSHR
VIWCPYIPEDEPAEGDEVSKLLVLTRGSKAELWSVAAVAARLGSGPIKISDVAQNDGWGG
MMEINQHSGTIVEATFSPDGTALATASLDGEVKFFQVYMHNSSTHQGAQQQPRCLHQWKP
HGGRPISSLFFLDDHKSYQPEAQFWRFAVTGCDNNSELKVWSCESWTCLQTIKFAPLNGK
TPVLKAGLDLSAGYLLLSDIYNKVLYVLSLAKDSSDALACVNTISEFLLPYPILSFGIVD
AGQRRVRPTGESLEDLCPLEDETEDQLVVRMYLVQPKSLQECHIAFRPVTQSDGHCLMDT
LSHDSLHYMEDIPGIAAMNQNGNVEENGDEELTVGAAIEAASNHSTGLNLMTPDAFSSPA
KKEGNNIDSNSASPDLGAVLSASPSLAQAVQALNSTEPPLATSELGEQAQASGGSSPSRE
VREIFSLGAPETEPEAKPDSETAVAEIWPGIPIGLLKDVRAIEEPEEFVEDEDAELPTKL
TKNDLPEASVESDQPEETNWCIPDTGSIIALTTKLDSILKTVEDQRQELRELRSEVTRLQ
QDTPVTARVESVMARATQQQNTSLEQTLLVQLSRQQEILCSLESAVTDKIEKNLPKLVDG
ALDPLRHQLRLDISRMDDLMKENLTQLVSGAHIRDTLALTAASAAKPVLEAVFKEAFTTV
LLPGMERACQTMFKQVQDAFSRGTREYIQNIDSMADKQRQRRNEQQSEALAATVRQELQN
ELSKGLRVMQEGTTRVVRDTIRENLSQHLTEISGARSRATTPGLQASPIGADAQARVLNL
LQRGQLNAAFQQALSASDLNLVVLVCQRTEPSRVFSPPPGLGSGGPRCLLQQPVLLSLIQ
QLSADLGQQTELKYRWLEEAVMNLNPDDPVTHEHMGTVLMALQSQLTAFITANPIHRSAK
QMKMLAMAAKAIRGQSL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgtgcaacggtgattcatcgatgacagggaaaatgattaagccgactgatgaa
agtgtcaggccgtatcaatatccgcaaactgtggaattcaatgggcaggaagaccagcac
tctgtagaactattcagtactgatgtgacgattgtcccatcgcccggagggcatgatcac
ggaagttccaaagtgaagctaaaaaacattgtcgattttacatgggaactacgattttat
acgggacaattacttgcagttcatatgtcaggcaaatatcttgcatatggaatcaaggct
ggaacaggcggaggagttgttcgtgtcgtttacaaggagagggagcagcgagcgttgttg
agaggaatgcgtggtgctattcaagatcttgcttttgctcatatcagtaacgcgatattg
gcgtgtgttgatcactctggtagcttgttcgtatattccatagaatctacacatctaaaa
ctcgtttgcaacctcgttctacaagttgatgcagatgatgcttcaccaactagtcaccgt
gtcatatggtgcccttatatccctgaagacgaaccagctgagggcgacgaggtatccaag
ctcttagtcttaacacgtggatctaaagctgaactttggtctgttgctgcagttgcagcc
aggcttggatctggtccaataaagatctctgacgtggcacagaatgatggatggggcggt
atgatggagatcaatcaacactctggcacaatagttgaggccacatttagtcccgatggt
actgctcttgctacagccagtctggatggagaagtcaagttttttcaagtatatatgcat
aatagcagtactcatcaaggtgcacagcaacaaccaagatgtctgcatcagtggaaaccc
catggcggtcgaccaatttcatcactattttttctagacgaccacaaaagctatcagcca
gaagcgcaattctggaggtttgctgtaactggctgcgataataattcagagttaaaagtc
tggtcctgtgagtcttggacatgtttgcaaactataaagtttgcaccattaaatggaaaa
acacccgtcttgaaagcaggtttggatttaagtgcaggctatcttcttctttctgacata
tacaacaaagttctgtatgtgttgagcctggctaaagatagttcggatgccttagcctgt
gtgaatacaatttccgaattcttattgccatatccaatcctaagttttggaatcgttgac
gctggacagcgcagagttcgacctactggggaatcccttgaggatttatgccctctcgaa
gacgaaacggaggatcagctcgtagttaggatgtatctcgtacaaccaaagtctttgcag
gaatgccacattgcctttagacctgtaactcagtccgacggtcactgtctcatggacact
ttgagtcacgattcgttacactacatggaagatattcccggtattgcggctatgaaccaa
aacggaaacgttgaggaaaatggggacgaagagctaacggttggtgcggcaatcgaggca
gcatccaatcatagtacaggtctgaatttgatgacgcctgatgctttcagctccccagca
aaaaaagagggaaataatattgattcaaattctgcaagccctgatctgggggctgtcttg
tcagctagtccctcactagctcaagctgtgcaagcattaaattcaaccgagccaccatta
gcgacaagtgaacttggagagcaagcgcaggcgagtggaggaagcagcccttcaagggaa
gtaagggaaatattctcactgggagcaccagaaaccgagcctgaagccaaaccagattct
gaaactgctgtggcagagatttggcctggtattccgattggcctactaaaagatgttcga
gccatagaagaacctgaagaatttgtggaggacgaggatgcagaactgccaacaaaatta
acaaagaatgatcttcccgaagctagtgttgaatctgaccagcctgaagaaactaactgg
tgtatacctgatactggaagtataattgctctaacaaccaaacttgattctattctgaaa
acagtcgaagaccagcgccaggagctgagagagttgagatctgaagtaaccaggttgcaa
caagatacaccggtaactgctcgtgttgaatctgtgatggccagagcgactcagcagcaa
aatacatccttggaacaaacactgcttgttcagctatcacgccagcaggagatactttgt
tctttggaaagtgcagtgacggataagatagagaaaaatttaccaaaactagtcgacggt
gcacttgatcccttgaggcatcagctgcgtttagatatatcacgaatggatgaccttatg
aaagaaaatctcacgcagttagtaagtggtgctcatatacgtgacactctcgcccttact
gcagcaagtgcagcgaaacctgtacttgaggccgtttttaaggaagctttcacaacagta
ttgttaccaggaatggaaagagcgtgccagactatgttcaaacaagttcaagacgcgttt
tctcgggggacccgtgaatacattcaaaacatagattcgatggcagataaacaacggcaa
cggagaaacgaacagcagagtgaagccctggcggcaaccgttcgtcaggagttacaaaac
gaactttctaagggactcagggttatgcaggaaggaacgacaagggtagttcgcgacaca
atcagggagaatttgagtcaacatctaacagaaatatctggagcaagatctcgcgcaaca
actccgggtcttcaagctagcccaattggtgctgatgctcaagcaagagttctgaatctt
ctacaaagaggccagctgaatgctgctttccagcaggcattgagtgctagtgacttgaat
ctcgttgttctcgtctgtcaacgtaccgaaccaagccgtgtcttttctccccctccaggc
ctggggtcaggtggcccacgctgtctacttcagcagcccgttctgctgtctttaatacaa
caactttcagctgatctaggacaacaaactgaattaaaatataggtggttagaagaagct
gttatgaacctaaatccagatgacccagtaactcacgagcacatgggaaccgtccttatg
gctctacaaagtcaattgacagccttcatcacagctaatccaatccacagatctgctaag
cagatgaaaatgcttgctatggccgctaaggccataagaggtcaaagcctatga
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