Neodiprion virginianus: 124298742
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Entry
124298742 CDS
T09046
Name
(RefSeq) transcription factor Sox-19b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvg03000
]
124298742
Transcription factors [BR:
nvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124298742
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
124298742
NCBI-ProteinID:
XP_046607116
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Position
2:32448784..32461883
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AA seq
385 aa
AA seq
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MRAGGAMCDGAFSETLRGMQGMSGASPPGGAGGGPMAITMGSPMNAANKKIQEDHIKRPM
NAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDEAKRLRAMHMKEH
PDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGGMGQASMGSYYGPAAAYGTLS
AASMAAAAAAAAQQSAAAMSAGLSAPAQVVSSMDAMKYSMEADKYRAAYMPPSTLTMSMY
SDPKYLDSSPKSYLDRGYLDSAMTKAYFESSKMYMDQKSMSGVEYNRPSYEPNKLYEESS
PGGPGRSPAESPDMSKQTGGERTEQGSSSASSTSTSSAASPGGLNSYYPGSRQPGLLPPQ
MGQYPGYQVPPAPGNDFPRPLAVIF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagggccggcggcgcgatgtgcgacggagctttctccgagacgcttcgtgggatgcag
ggaatgtcgggagcttcgcctcccggcggagccggcggtggaccgatggcaattaccatg
gggagcccgatgaacgcggcgaacaagaaaattcaggaggaccacataaagaggccgatg
aacgctttcatggtctggtctcggctacagcggcgaaagatcgcccaggagaacccgaag
atgcacaacagcgagatctccaagaggctaggggcagaatggaagcttctcaccgaagac
gagaaacgcccgttcatcgacgaggccaaaaggctccgggctatgcacatgaaggaacat
ccagactacaaatatcgacccagaagaaagccgaaaaccctcaggaaggaaggctacccc
tacagcatcccttacccaagtgtgccaatggacgccctcagagctggaatggccggtggt
atgggacaggcgagtatggggtcttattacggccccgcagcagcttacggcacattatct
gccgccagtatggcagccgctgcagcggctgcagcccagcaatccgctgccgcaatgtct
gcaggtctctcggcacctgcacaggtggtcagctccatggacgccatgaagtattcgatg
gaggccgacaaatacagagccgcctacatgccgccgagcacactgacgatgagcatgtac
tcggatccgaagtacctcgactccagtccaaaatcatacctggatcggggctaccttgac
tcggcaatgacaaaggcttacttcgagtcctcgaaaatgtacatggaccagaagtcgatg
agcggcgtcgaatacaacaggccgagctacgagccgaacaagctttacgaggagtcgagc
cctggggggccgggaagatcgccggcggagtcgcccgacatgagcaagcagaccggcggc
gagagaaccgaacagggctcgtccagcgccagctcgacctcgacttcctccgcggcgagt
cccggcggcctgaacagctactatccgggatccaggcagccggggctgctgcccccgcag
atgggacagtaccctggttaccaggtgccccccgcaccgggaaacgactttccgcgaccg
ctggcggtcatcttctga
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