Neodiprion virginianus: 124298832
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Entry
124298832 CDS
T09046
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
nvg
Neodiprion virginianus
Pathway
nvg03013
Nucleocytoplasmic transport
nvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124298832
03015 mRNA surveillance pathway
124298832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124298832
03041 Spliceosome [BR:
nvg03041
]
124298832
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124298832
Spliceosome [BR:
nvg03041
]
Complex C
Other components
EJC/TREX
124298832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
124298832
NCBI-ProteinID:
XP_046607313
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All DBs
Position
2:complement(35004133..35006931)
Genome browser
AA seq
386 aa
AA seq
DB search
MRKLETRESWGAEKLEAQLEAARDNLRGLDRSIQKILGRDPPDGENPLQPTARIAQKRPV
QEDHRRRQVADFAVLPNNLTVFKRRWVAPPGEPKTVFSRLSARIPSNADDSADEDDNTAK
PAVSSRVIATPREIPSRQEVIRRERVDERSRQRNKRMFGALLGTLQKFRQEETKLKAKED
KKAEVEARVEEAGRREKEELRRERQQLFQSRKRQQAEVRSLEAKLVRSRQFQEWRASQLP
LTSFIRTRTQPSIYYLPKRKHSRTDSLLALSAKELNDEIERREKILMEELEQIEFQAGLG
KQLSNESNIVSTVQEEPPTPMEEGEENRDPNHEVEQIEKEEVQSSGSPTCESKELIPLPI
DSAPVEVAEVQETQEMQEMLEDANNG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagttggaaaccagagagtcgtggggcgccgagaagctggaagcgcagctagaa
gcagcgcgcgataacctccgaggtctcgatcgaagtattcaaaagattctcggccgggac
cctcccgatggcgaaaatcctctccaaccaacggcaaggattgcccagaaacgaccggta
caagaagatcatcgcagacgacaggtggctgactttgcagtcctgccaaataatttaacc
gtctttaaaagacggtgggtcgctcctcctggagaaccgaagacagtttttagtcggctt
agtgctcgcatcccgtcaaatgcagatgacagtgccgacgaagatgacaacactgccaag
ccagctgtctcctcaagagtgatagcaacacctagagaaataccttcgcgccaagaggtt
attaggcgagaaagagtggatgaacgaagtcgtcagcgcaacaaacgaatgtttggagct
ctcctcggtactttacaaaagtttcgtcaagaagaaactaaacttaaagccaaggaggat
aaaaaagcagaggttgaagctcgtgtagaggaggctggtagacgggagaaggaggagctg
aggagagaaagacaacagttatttcagtctcggaaacgtcaacaggcagaagttcgcagt
ttggaagctaaactggtgcgcagccgacaatttcaggaatggcgcgcgtctcaattaccg
cttacatcatttattcgcacgcgtactcaaccatctatctattatttaccaaaacgaaaa
cattcgcgcacagattcgcttttagctctctccgcaaaggagctcaatgatgagatagaa
aggagggaaaaaatcctgatggaagagctagagcaaatagaatttcaagccggattagga
aaacaactttccaatgaatcaaacatagtttcgaccgtgcaagaagaacctccaacacct
atggaagagggcgaagagaatcgagatccaaatcatgaagtcgaacagatcgaaaaggaa
gaggtacagtcttcaggttctcccacgtgcgaatcaaaggaactaattccgctcccaata
gattcagctccagtagaggtagcagaggtgcaagaaacgcaggaaatgcaagaaatgcta
gaggatgccaataacggctag
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