Neodiprion virginianus: 124298847
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Entry
124298847 CDS
T09046
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
nvg
Neodiprion virginianus
Pathway
nvg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124298847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124298847
Membrane trafficking [BR:
nvg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124298847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
ANAPC4_WD40
zf_RING_Vps8
TPR_Vps41
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8_fungal
PQQ_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_LRRK2
TPR_VPS8_2
Smg8_Smg9
zf-RING_11
WD40
zf-RING_5
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124298847
NCBI-ProteinID:
XP_046607344
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All DBs
Position
1:19488569..19636057
Genome browser
AA seq
1300 aa
AA seq
DB search
MAENVLGSEIGFQDYHATEAIHLDIEELDDAEYAIPAVEEPPSLESILTELDSGSLSGTE
DEFVTPAEKLGGSETASVGSLLSLNSVSKPFRPSQSQSSSAILRHVILKGISSQISSASE
RINAGLASAMAAGGNMLVIGTSHGLILGFDSNQTLRWCDQEARHQGSVSALCFNHDGSRL
LAGFARGHILMLESSSGKVLRTLTDVHPPGTAVLHVKFTDSPKLALCSDSGGSVFELNFT
RVMGVRGCDSKCLFSGSRGEVCTLEPLLLNQLPTHSLKNYTLVAMATLSKVIVVSIRPRM
RVVLTHALGGTAIAPPQVSWQLVVIQAADSTRVVDPVLALARDDAVHFYQVCTERNSRIR
LSPLQRVTVSYMISNLRWLNARSLALLDTQEKLHLLDVRLQDELETLDLSRVGISYASSH
FKGLSTGGNVSKAMALAGERACYNTVIAFGSQLLLLGTKSLHAVCIRTWTERLRHLTLQR
RFPEALALGLSFYQDKGQAVVGLCGSKQRRKQIARDKVCDVLIQYMDDLNHCSVENCAEV
VESCVNFCIQLENTDLLFGKLWELVCETDEFRGSYLRALEGPLLNGSLAPRLPPLISQQL
VSLYEQEERLDSLQAIIVLLDVDCLDIHQVTKVCGQQGLWEALIYLQTSALSDFTAPIHQ
LMPVLQMALANARTQKLSPDKIRLGNAILVYASCCLAGRGFPRGNLPEGVTQRAKADVLR
ALLSQHSSSASDAERQYPYIRTLLEFDAKGFLDVITIAFQEPEFMSEMGLRQRQRLIDIL
LNIVLPTTPLSPDNYDYLTDEQRAVVLNFISNEVAESSVTLEAGALNRMVEMLSTGTNNS
EDMSRDIEVEKENAILQLLHSKKLTNISDNCLLNLAHNANFLRVAETIYCGQEDWISVCR
CMLTDKSRRYEVWEWLDCLPLDSLQAVVTAHAAELVTVDAARTAVLISNRMPNSLDNILQ
KMNEDPKLEYALLGALYQLIQYGEEDIKMELTTEILEKYLKLMCNLEPERVVQHLCGPHG
CRLNEVLKIVQDINHTEAIALMLEKLGNYQEAFDLLLADLQSLFEMHCGGDIKSNKAIQA
TSELAALCRRAAGHLDWMPLVETVLHPYTENNIQKGESLQGKLLRIVLESLSGTTTLSTV
LEQILKHPLATGGTIGDIRELLTGVLTHSCYDQTLVEASARLVSMELHEALKKSLRDAGK
AFQNVCLYCPVCRRGLSQCTDYAVVFRCGHGYHISCIGDSKVCYQCLRTKGWAPTVTNSL
PTTKRPPEKRKNQPPSLTTDRDLRLRLAPQILLPDFEGIF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaatgtactggggtccgagatcggctttcaggattatcacgctaccgaagca
attcatttagatattgaagagctagatgatgctgaatatgccatcccggcggtggaggag
ccaccctccttagagagtattttgacggaactagattctggttcactatctggaacagaa
gatgagtttgtaacaccagcagaaaaactgggaggtagcgagacagccagcgtagggagc
ttattatctctaaattctgtcagtaaaccatttagaccatctcaatcacaatcgtcgagt
gctatattgaggcacgttatactgaagggaatatcttcacaaatttcatcagccagcgaa
aggataaatgctggtttagcaagcgccatggctgctggtggtaacatgttagtcataggc
accagtcacggtttgattctgggctttgattctaatcaaaccttacgttggtgcgaccaa
gaagctaggcaccaaggctccgtttcagctttatgcttcaatcacgatggttcgagacta
ttagcaggctttgcaagaggacacatactaatgctagaaagctctagtggaaaagtttta
aggacactcactgacgtacatcctcctgggactgcagtgttacatgtgaaattcacagac
tcaccaaaactggctttgtgcagtgacagtgggggttctgtatttgaattaaattttact
cgcgttatgggagttagaggctgcgacagcaaatgtctctttagcggttcaaggggcgaa
gtttgtacattggaaccccttctattgaaccaactcccgacacattcgctgaagaattat
acgctggtcgcaatggctactttatcaaaggtaatagttgtttctataagaccacggatg
cgggtggttctcacgcatgccttaggcgggacagccattgctccgccacaagtatcgtgg
cagctagttgtcatacaagccgcagattcgacccgtgtcgttgatcctgtgttggcctta
gctcgagatgatgccgtacacttctatcaggtttgcacggaacgaaattctaggatacgt
ctttcaccattgcaacgtgttactgtttcctatatgatcagcaatttaagatggctaaac
gcaaggtccctggcactgcttgatacgcaggaaaaattgcatttgcttgatgtcagattg
caagacgaattggaaactctggacttgagtagagtgggaatttcctatgcatccagtcat
ttcaaaggactgtctactggtggcaatgtctcaaaggcaatggcgttggcgggtgaaaga
gcttgttataatacagtaatcgcttttggcagtcaactgctactactcggaaccaaaagc
cttcacgcagtttgcataagaacctggactgaacgtttacgccacttaacactgcaacgg
cgtttcccagaagcccttgccttggggctttctttttatcaggacaaaggacaagctgtc
gtaggtttgtgtggttccaagcaacgccgtaagcagattgcccgtgacaaggtctgtgat
gttttaattcagtacatggatgacttaaatcactgctccgtcgagaactgcgcagaagtg
gtggaaagctgcgtgaatttctgcatacaattagaaaataccgacttattatttggcaaa
ctgtgggaacttgtatgcgaaacagacgaatttagaggaagctatttacgagcacttgag
ggcccactgttgaatggaagtctggctccacgattaccgccacttatctctcaacagtta
gtgagcttgtatgaacaagaagaacgattggattcattacaggccatcatcgtcttgctt
gacgttgattgtttggacatacatcaagtaacaaaagtatgtggtcaacaagggctctgg
gaagctctgatttatttgcagacatccgctctaagtgattttacagcaccaattcaccag
ctcatgccagttctccaaatggcacttgccaatgccagaacacagaagttatcaccggat
aaaataagattaggcaatgccattttagtatatgccagttgctgccttgcaggccgtgga
tttcctagaggcaatctaccagaaggtgtaactcagagagccaaagctgatgtcttgcgc
gctcttttgtcgcagcattcaagttcagcgagtgacgctgaaaggcagtacccgtatatc
agaaccttacttgaatttgatgccaaaggttttctagatgtgataacgattgcatttcaa
gaaccagaattcatgtctgaaatgggtttgcggcagcgtcagagattgattgacatttta
ctgaacatagttctgcccaccacacctctaagtcctgataattatgattacttgactgat
gaacaaagagcagtagttttaaattttatatccaatgaagtggctgaaagctcggtaaca
ttagaagccggtgcgttgaacaggatggtagaaatgttatcgactggtacaaacaacagt
gaagacatgtcaagagacattgaagttgaaaaagaaaatgcaattctgcaacttttacac
tcaaagaagttgacaaatatatctgataactgcctactcaatcttgcacataatgctaac
tttttgcgagttgctgaaaccatttactgcgggcaagaagactggatatcagtttgccga
tgcatgctgacagacaagtcacgtcgttatgaagtatgggaatggctggactgtttgcca
ttagactcactgcaagcagttgttaccgcacatgctgctgagttggtgacagttgatgca
gctcgaacagcagtgctcataagtaatcgaatgccaaacagtttagataacattcttcaa
aaaatgaatgaagatccgaagttagagtacgctttgctcggagccttgtatcaattaatt
cagtatggagaagaggatataaaaatggaattaaccacagaaatacttgaaaagtacttg
aaattaatgtgtaatttagaaccggagcgtgttgttcaacatctctgtggaccacacggt
tgtcggttgaacgaagttctgaaaatagtccaggatataaaccatacagaagctatagct
cttatgttagaaaaattaggcaattatcaagaagcattcgatttactactagcggatctt
caaagtctgtttgaaatgcactgcggtggggatatcaagagtaacaaggctattcaagca
acttcagaattagcagcactatgcagacgagctgctggccatctggactggatgccgcta
gtagaaacagtgttacatccatataccgaaaacaatatccaaaaaggtgaatcgctacaa
ggcaagttgcttcgaatcgtgctagagtcattgagcggcaccacaaccctgtccacagta
ttagaacaaattttaaaacatcctctagctactggtgggacaattggtgatataagagaa
ttattaactggcgttttgacacactcttgttacgatcaaacactagtcgaagcaagtgca
agattagtaagcatggaactgcatgaagctcttaaaaaatctctcagggatgcgggcaaa
gcgtttcaaaatgtgtgcttatattgcccagtgtgtcggcgaggactttcacaatgcaca
gattatgcagtagtgtttagatgtgggcatggataccatatatcttgcataggagattct
aaagtatgctaccagtgcttgcggactaagggctgggcaccaacagtgaccaattcactt
ccaacaactaaaagaccaccggaaaaacggaagaatcagccaccaagccttacgacggac
agagatctcagactacggctagcgccacaaattcttcttccagactttgagggaatattt
taa
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