Neodiprion virginianus: 124299047
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Entry
124299047 CDS
T09046
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
nvg
Neodiprion virginianus
Pathway
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124299047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124299047
Spliceosome [BR:
nvg03041
]
Complex C
Other components
Step II factors
124299047
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
PQQ_2
WD_LRWD1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
124299047
NCBI-ProteinID:
XP_046607842
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Position
2:15123599..15127239
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AA seq
585 aa
AA seq
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MLALKEYVSSDDNSESEEASSVPATEIEVNDSTISTDEAVHLKPLPGGKSISSLALQVRL
APEVVPTGTELCVRHIDSTSKEVMHNPKFEELFAPDVGPDNPFKTQQQRATKNMLSGYVE
QAHISEFQFENQRRTFTSYGYALDPTVDGSTEEGKTLVGAKEAAEETGAKTVFENTELRP
ADKRKRNRNNDPADIEGFLGPWGGYVDERRVIKPTEEEAAELEEILAKRNKRGKQTEDKP
LEEKTVLHIKDSVDYQGRSFLHAPQDVGVNLRSESPPDRCFLPKSQIHTWEGHTKGISQI
RWFPRTAHLLLSCSMDCRVKLWEVYKDRRCVRTYYGHRQAVRDVSFDNDGKRFLSAGYDR
YVKLWDTETGACLSRFTSRKIPYCAKFNPDPDKQHLFVAGTSDKKIICWDIRSGEITQEY
DRHLGAVNTITFVDENRRFVTTSDDKSLRVWEWDIPVDMKYIADPTMHSMPAVTPSPNQK
WLACQSMDNKIVIFSALNRFKMNRKKTFTGHMVAGYACGLDFSPDMSYLVSGDADGKCYI
WDWKTTKLYKKWKAHDGVCISTLWHPHEPSRLATAGWDGKIKYWD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgctcaaagagtatgtgagtagcgatgataacagtgaatccgaagaagcatca
agtgtccctgcaacagagattgaggttaacgattcgaccatttcaaccgatgaagcagta
catttaaaaccactgcctggagggaaatccatatcttctctcgccctccaagtcagatta
gccccagaagttgttccaacgggcacagaactatgcgttcgacacatagattctacgtca
aaagaggtaatgcacaatccaaaatttgaggaactctttgcacctgatgtaggaccagat
aatccattcaaaacacagcagcagagagcaacaaaaaacatgctctctggatacgtggaa
caagcgcatatcagtgaatttcagttcgaaaaccagcgtcgaacttttacaagttacggg
tacgcattggatcccacagttgatggtagtacagaagaaggaaaaactcttgtcggcgcc
aaagaggctgccgaagagactggagcaaagacagtatttgaaaatacagaattgagacct
gcagacaagagaaaaagaaacagaaacaatgatccagccgatattgaaggattcttgggt
ccttggggaggctacgtagacgaaagacgagtgataaaacctaccgaggaagaagctgct
gagcttgaagaaatcttagccaaaagaaataagaggggcaaacagaccgaagataaacca
cttgaggagaagactgtgctgcacatcaaggacagtgtggattaccaaggtcgatcattc
ctgcacgcaccacaagatgtgggtgtcaatctacggtcagaatcaccacccgatcgatgt
ttcttgccaaaatcccaaattcatacgtgggaaggacacaccaagggtatttcgcaaatt
cggtggttcccacgaacggcgcatttgcttctttcctgcagcatggactgtagagtcaag
ctgtgggaggtgtacaaagacaggaggtgtgttcgtacttattacgggcatcgacaggct
gtgcgcgatgtcagttttgataatgacggaaaacggtttctgtctgccggctacgacaga
tatgttaaactttgggatactgagactggcgcttgccttagccgttttaccagtcggaaa
ataccttattgtgcaaagtttaatcctgatccagacaagcagcatctgtttgtagctgga
acaagtgataaaaaaatcatttgctgggatatcaggtctggtgagattactcaggaatat
gacagacacttgggtgctgttaacacgattacattcgttgatgaaaatcgaagattcgtc
acaacttcggacgacaaaagtctcagagtgtgggaatgggacattccggtagatatgaag
tacatagctgatccaacgatgcactcaatgccagctgttactccatctccaaaccaaaag
tggcttgcctgccaaagtatggacaataagatcgtgatattctcggctcttaatcggttc
aaaatgaatcgcaagaaaacttttaccgggcatatggtcgccggatatgcttgcggactt
gacttttctccagatatgagctatctggtttccggagacgcagatggtaaatgttacata
tgggactggaagacgacaaaactgtacaaaaagtggaaagctcacgacggtgtttgcatc
tcgactctttggcatcctcacgaaccttctcgccttgcaacagctggctgggatggtaaa
atcaagtattgggattag
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