Neodiprion virginianus: 124299096
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Entry
124299096 CDS
T09046
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
nvg
Neodiprion virginianus
Pathway
nvg03420
Nucleotide excision repair
nvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124299096
09124 Replication and repair
03420 Nucleotide excision repair
124299096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvg04121
]
124299096
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124299096
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvg04147
]
124299096
Ubiquitin system [BR:
nvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
124299096
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124299096
TCR (transcription coupled repair) factors
Cul4-CSA complex
124299096
Exosome [BR:
nvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124299096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
HbrB
DUF2018
Motif
Other DBs
NCBI-GeneID:
124299096
NCBI-ProteinID:
XP_046607988
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All DBs
Position
2:12871889..12878478
Genome browser
AA seq
817 aa
AA seq
DB search
MSRIGRTQLLPSAQVKRSVPTDSVVNFNHSAKRARHPNGTTGSSATAGQLEEIENMTDSA
ANTQKRANFSALTVASPNGVNKISANATNAKPGSAKKLIIKNFKNKPKLPDNYQERTWEK
LREAVVAIQTSKSIRYSLEELYQAVENMCNHKMASTLYANLTELTESHVKANIEQFLAES
MDRHIFLKKMNECWQSHCRQMIMIRSIFLYLDRTYVLQNPSISSIWDMGLHLFRLHIVLN
NLVQTRSVEGLLMLIEKERQGDTVDRTLLKSLLRMLSDLQIYQEAFEAKFLVATERLYAA
EGQRLMNEHDVPEYLAHVDKRLQEENERLLHYLDTSTKWSLIHTVEKQLLSEHITSLLQK
GLSGLLDENRTSDLSLLYNLYSRVKNGLIELCLNFNSYIKKKGRTIVIDPEKDKTMVQEL
LDFKDKMDNIVNTCFHRNEKFGNSLKEAFEAFINQRANKPAELIAKFVDCKLRAGNKEAT
EEELERLLDKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGG
GFTSKLEGMFKDMELSKDINIAFKQYAGNLQNEFSASNLDLTVSILTMGYWPTYPVLEVT
LPAEMVQYQDVFNKFYLGKHSGRKLQWQPTLGHCVLKAWFNQGNKELQVSLFQALVLILF
NDTDNLSLEDIKAATNIEDGELRRTLQSLACGKARVLQKNPRGRDVADNDRFVFNAEFTN
KLFRIKINQIQMKETNEEQKATEERVYQDRQYQIDAAIVRIMKMRKTLTHNLLISELYNQ
LKFPVKPADLKKRIESLIDRDYMERDKDNANQYNYVA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaatcgggagaacccaactcttgccgtcagcacaggtgaaaagatcggtgccc
actgactcggtggttaatttcaaccacagtgcgaaacgcgcgaggcacccgaacgggaca
acgggaagcagcgcgacggctgggcagctcgaagagattgaaaacatgaccgactcggcg
gcgaacacccagaagagggcaaatttctcggctctgactgtcgccagtccgaatggggtt
aacaaaatatcagctaacgcaacgaacgcgaagccaggatcggcgaaaaaactgataata
aagaacttcaaaaataagcccaaacttcctgacaattaccaagagcgtacgtgggaaaag
ttgcgggaggcggtcgtcgccattcagactagcaaaagcatccggtattctttagaagaa
ttgtaccaggctgtggaaaacatgtgcaatcacaaaatggcctcgactttgtacgccaat
ttgacagagctcaccgaatcccacgtcaaggctaacatcgaacagtttttagcagagtct
atggataggcatatatttctcaaaaagatgaatgagtgctggcagtctcactgtcgacag
atgattatgataaggagcatattcttgtaccttgacagaacctatgttcttcaaaatccc
agcatctcatccatatgggatatggggctgcatttattcagacttcacatagtcttaaac
aacttggtgcagactagatctgtcgaaggattgcttatgctcatagaaaaggaacgccaa
ggggatacggtggaccggactcttctaaaatccttgctgagaatgttgtctgatctacaa
atttaccaagaagcctttgaagccaaatttttggtggctacggaaagattatatgccgca
gagggacaacggcttatgaacgaacatgacgtgcctgaatatctggctcacgttgacaaa
cgtcttcaggaagagaatgaacgactgttgcactacctcgatacatcaacaaaatggtcc
ctgatacatactgtagaaaaacaattattatcagagcacataacaagccttttacagaag
ggtcttagcggtttgttggatgaaaatagaacgagcgacttgtcgcttctctacaatttg
tacagccgtgtcaaaaatggcctgattgaactttgccttaactttaattcttacattaag
aagaagggaaggacaatagtgatcgatcctgaaaaagacaaaactatggttcaggaactg
ttagatttcaaagacaaaatggacaatatagtgaacacgtgttttcaccgaaatgagaag
tttggcaatagtttgaaggaagctttcgaagctttcataaaccaacgggcaaacaaacca
gctgaactaatagccaaattcgtcgactgcaagctacgtgcaggaaacaaagaggcaact
gaagaggaactcgaacgattactcgacaagataatggtgctgttccgttttattcatggt
aaagacgtgtttgaagcattctacaaaaaggatcttgccaaacgtttgctggttggaaaa
tccgcgtctgtcgatgctgaaaagtcgatgctctcaaaactgaagcaagaatgcggcggt
ggatttactagcaaacttgaaggaatgttcaaggatatggaacttagtaaagacataaat
atagccttcaaacaatacgcaggcaatctccaaaacgaattttcggctagtaatttagat
ctcacagtatctatattgacaatgggatattggccaacttatcctgtactagaagtgacc
ttacctgctgaaatggtacagtatcaagacgtgttcaacaagttttatctcggcaagcac
agtgggagaaaattacagtggcagccaacactaggacactgtgttctcaaagcgtggttc
aatcagggcaacaaagagctgcaagtgtcattgttccaagcacttgttttgatactattc
aacgacacagataatctttcccttgaagatattaaagctgcgacaaatatagaagatggt
gaacttcgaagaactctacaatcgttggcctgtgggaaagctagagtattgcaaaagaat
cctcgaggcagagacgttgctgacaacgacaggttcgtcttcaacgcggaattcacgaat
aaactcttcagaattaagatcaaccaaatacaaatgaaagaaacgaacgaagaacaaaaa
gcaacagaggaaagagtttatcaagataggcaataccagatagacgcggccatagtcagg
attatgaaaatgcgaaaaacattgacacacaatctactcatcagtgaactttacaatcag
cttaaatttccagtcaagcctgcagacttgaagaaaagaatcgaatctttaatagataga
gattacatggagcgcgataaggataatgcaaatcagtacaactacgtagcgtaa
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