Neodiprion virginianus: 124299154
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Entry
124299154 CDS
T09046
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
nvg
Neodiprion virginianus
Pathway
nvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124299154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvg03009
]
124299154
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124299154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_22
AAA_16
AAA_33
AAA_5
TIP49
AAA_14
RNA_helicase
Mg_chelatase
AAA_28
NPHP3_N
AAA_2
Rad17
nSTAND3
ABC_tran
AAA_18
NACHT
AAA_17
IstB_IS21
TsaE
ATPase
Parvo_NS1
AAA_7
Sigma54_activat
Vps4_C
Sigma54_activ_2
DUF815
TPR_5
Motif
Other DBs
NCBI-GeneID:
124299154
NCBI-ProteinID:
XP_046608102
LinkDB
All DBs
Position
2:complement(37107694..37113766)
Genome browser
AA seq
970 aa
AA seq
DB search
MNKFVKLNTSLDIIPLQGSSNEDKSKNTNRQRIDELPRSVMRDPLMVSRVYAFLLDNEDK
TYIDVNEIADYLQKRYRDYRTKKRSAFRAMVRKAYNEIADGLAKKNEFNPNAPWQEDEDD
DDEEVDLELDAPIDSLNNQLLKMYKKNLDGQNGNSSDKELIDISSDDEQGKMEATSSGHA
KKPKESQFSEELKNSKKLKFIKEPKETEENKGTTEPKDVHREVKKNPMYTRSSTPKPSPL
EVDSTLSKGRVSEIVLQSPPPEKVAKKRKVERDGNYPVGTATPAKKKREVTESKVQFADI
GGNTKVLEEVCKLLIHIKHPEIFKKLGISPPRGFLLHGPPGCGKTLLAHAIAGELAVPLI
KVAAPELVAGVSGESESRIRDLFEQAVAVAPCVLFIDEVDAVAPHRATAQREMERRIVAQ
LLSCLDDLGSKENGDRVLVLGATNRPDALDPALRRAGRFDREVSLGIPDREARAGILAVI
TTKLALASDVSLTRIAALTPGFVGADLVALIREAAVAAVNRVFGDLKKKTAVETKPVEIE
EPEEVVKSIPDTEVCGNVQPDCDNVPNGTEGSISKDSIVPEIAAAKPENTPMPNELESQN
VDPVEETKKITAFSKSSELTDLMMWLHDQPPLSEEYLQRVFIEHQDFEAALSVVQPSAKR
EGFATVPDVTWDDIGSLQNIRQELQMSILAPVKHSEKCAELGLTTATGVLLCGPPGCGKT
LLAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCFIRARNSAPCVIFFDELDALCPK
RSDGDNSATSRVVNQMLTEMDGVEGRRGVFLMAASNRPDIIDPAVLRPGRLDRILYVGLP
NPTDRVDILRALTKNGVKPKLATDVDLAQIGFSEKCDGYSGADLAALVREAGLEALKELI
NGYQGPVEVAMRHIGIALDKIRPSVQENEIKHYEKLRKIYSPLKDDLDVTPMETPIDAQL
VDTTMEAMET
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttgtcaaattgaatacttcgctcgacattattcctttgcaaggttcaagt
aatgaggacaaaagcaagaatacaaacaggcagagaattgatgaacttcccagatcagtc
atgagggacccactgatggtttcaagagtctacgcgtttttacttgacaacgaggacaaa
acttacatagatgtgaacgagattgctgattatttacaaaaaagataccgtgactatcgc
acaaagaaacgcagtgcctttagggcaatggtacgcaaggcgtataatgagattgccgac
ggcttagccaaaaagaatgaattcaatcccaatgcaccttggcaagaagatgaagatgac
gatgatgaagaggttgatttggaactggatgctcctattgattcattgaacaatcagctg
ctgaagatgtataaaaagaatttggatggtcagaatggaaattctagtgacaaagagttg
atagatataagcagtgacgatgagcagggtaaaatggaagcaacatcttctggacatgca
aagaagcccaaggaatcccaattttctgaagaactcaaaaattccaagaagctcaaattc
atcaaagagcccaaggagactgaagaaaacaagggaacaactgagccgaaggatgttcat
agagaggtgaagaaaaatcctatgtataccagatcaagcactcctaaaccttcacccttg
gaagtagattccacactttcaaagggacgtgtgtctgaaatagtgttacaatctccccct
ccggagaaagttgctaagaaacgaaaagttgaaagagacggtaattacccagttggcaca
gcaacgccagccaaaaagaagcgtgaagtgacagaatctaaagttcaatttgccgatatt
ggtgggaatacaaaagttttagaagaagtttgcaagcttttgattcacatcaaacatcct
gagattttcaaaaaattgggtatctctccacctcgagggtttttactccacggaccacca
ggatgtggaaaaacactgttggcacacgcaattgctggggaattagcagtccctctaata
aaagttgctgccccagaacttgtcgcaggtgtttctggagagagtgaatctcgaatacgt
gatttgtttgagcaagcagtagcagtagctccttgtgtcttattcatagatgaagtggac
gctgttgcgccacatagggctacagctcaacgagaaatggaacgacgaattgttgctcag
ttgctttcatgtcttgatgatttgggcagcaaagagaatggtgatcgtgttttggtcctg
ggtgctacaaatagaccagatgcgttggatccggctctgaggcgagctggtcgatttgat
cgtgaagtatcactaggaattcccgatagagaagcaagagctggaattttagctgttatt
acaaccaagctagctctagcatcagacgtcagcttaaccaggatagctgcacttactcca
ggctttgtcggtgcagatttggttgcattaatcagagaagctgccgtcgcagctgttaat
agagtattcggagatctcaagaagaaaactgccgttgaaactaaaccagttgagatcgag
gagccggaagaagttgtcaaaagtattccagatactgaagtttgtggtaatgtacagcca
gattgcgacaacgtaccaaatggaactgaaggaagtatcagcaaagacagcatagtgcca
gaaatcgcggcagcaaagccggaaaatacccctatgccaaatgaactggaatcacaaaat
gttgatccagttgaagaaacaaaaaaaattaccgctttttcaaagtcatcagaattgact
gatttgatgatgtggctccacgaccaaccgccactgtcggaagagtaccttcaaagagta
tttatcgaacatcaagattttgaagctgctctgtctgttgttcaaccatctgcaaagaga
gaaggattcgccacagtcccagatgttacgtgggacgatattggatctctacaaaatatt
cgccaagaattgcaaatgtctatactggcacctgtgaagcattccgaaaaatgtgcagag
ctgggccttacgactgcaactggagtcctgctgtgtggtcctcctggttgtggcaagact
ttgctggccaaagcaatcgctaatgaagctggtataaactttatttctgtcaaaggacca
gaactattaaacatgtacgttggagaaagtgagaaggctgttcgacaatgcttcattaga
gcacgaaattctgctccgtgcgttatattcttcgacgaattggatgccctgtgtccaaag
agatcggatggtgataattcggcgacatcccgtgtggtgaaccagatgttgacggaaatg
gatggagttgaaggaagacgcggagtttttcttatggctgcaagcaatcgtccagatatc
atcgaccctgctgttctgagacctggaaggctcgatagaatcttgtacgtaggattacca
aatccgacagatcgtgttgatatcctgagagctttgacgaagaatggagtaaaaccgaaa
ctagctactgatgtagatctggcccaaataggatttagtgaaaaatgcgatggatattca
ggtgcagatttggctgccttagttagagaggcagggcttgaggcgttgaaagagttaatt
aacggatatcaaggacctgtggaggttgcgatgaggcatattggcattgctcttgacaaa
atacgaccatcggtccaagaaaacgaaattaaacattacgaaaagctgcgaaaaatttat
tcaccgctgaaagatgatttggatgttactccgatggaaactccgatagatgcacagttg
gttgacacaacaatggaagcaatggaaacgtga
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