Neodiprion virginianus: 124299289
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Entry
124299289 CDS
T09046
Name
(RefSeq) protein SMG9 isoform X1
KO
K18735
protein SMG9
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124299289
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124299289
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
MMR_HSR1
RsgA_GTPase
nSTAND3
Ploopntkinase3
DUF6498
ABC_tran
RRF
RNA_helicase
NB-ARC
Motif
Other DBs
NCBI-GeneID:
124299289
NCBI-ProteinID:
XP_046608368
EnsemblRapid:
ENSNVRG00000000772
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Position
2:17055127..17059825
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AA seq
379 aa
AA seq
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MSSRKTLSASKDMDNKDGENRALIKVIDRPTFILKTREGESRAVSPSQRNGSKKDTESNT
SSKLADTRPALPTRLEMTHTVKFMDEGMQLLESPLDFLYDQQDFLVVGCVGTRGVGKSTI
MSLLTANYMSDVFPTQTLSHHESGSNCTSGVDFYVTKNRVIYLDTQPILSGVAIDHSGLY
EQKKNNNDFANIENNVELQSLQLTSFLLSVCHVVIFIQDWFVDPNLIRFIQTAEMLKPSS
ASAMDQDFVEYYPHILFLHNKAELQDFMPDSMNMMKDFYNKVFINSRLLTHSGLNMASSV
VDGQLNLFVIPEITNEDETIVHDSAEKISEKLRMRIHGISRNNMTSTVLTEKNWYHYASK
IMDTIKKSHLFSEYGRLMP
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccgtaaaacactttctgcttcaaaagatatggataataaggacggtgaaaat
agggcactgatcaaagttatcgatcgtccaacatttatattaaaaacccgagaaggagaa
agccgtgcagtgtctccgagtcaacgaaatggcagcaaaaaagatactgaatctaatact
tcatctaaattggcagatactcggccggcacttcccacccgtcttgaaatgacacacacc
gttaagttcatggatgaaggaatgcaacttttggaaagtcctttggattttttatacgat
caacaggattttctggttgttggatgtgtcggaaccagaggagtaggaaagtcgacaata
atgtcattgttgaccgccaattacatgtctgatgtttttccaacacaaacgttgtcgcat
cacgaaagtggctcgaattgtacgtctggcgtagatttctatgtgactaaaaaccgagtt
atctacttggacactcagcctatattatctggggtggcaattgatcactctggattatac
gagcaaaagaaaaataacaacgattttgcaaacatagaaaataacgtggaactgcaatcc
ttacagttaacatcgtttctgctgtctgtttgtcacgttgtaatattcattcaggactgg
tttgtagatcccaatttaatcagattcattcaaactgccgaaatgctgaaaccttcttcg
gcgtctgctatggatcaagactttgtcgaatattatccacacatcctctttctgcacaat
aaagctgagttacaagatttcatgcctgattctatgaacatgatgaaagacttttataac
aaagtatttataaactctagactgctgacacacagtggattaaatatggcttcatccgtc
gttgatggacaactaaatttattcgttataccagaaattacaaacgaagatgagacaatc
gttcatgatagtgcagaaaaaatatcagaaaaattgcgtatgagaatacatggtatatca
cgtaacaacatgacttcaactgtattgactgaaaaaaattggtaccattatgcttccaaa
attatggatacgataaagaaaagtcatttgttttctgaatatgggagattaatgccgtga
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