Neodiprion virginianus: 124299362
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Entry
124299362 CDS
T09046
Name
(RefSeq) protein HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
nvg
Neodiprion virginianus
Pathway
nvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124299362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124299362
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124299362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
Zfx_Zfy_act
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
124299362
NCBI-ProteinID:
XP_046608504
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Position
2:2390290..2395608
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AA seq
691 aa
AA seq
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MSRHRNVRSMNYSDEYDGYDDVYGHSVEDDYCVSPSVSILAEQFLFDRNKQHNISSYITE
DDIVEEDETQEETPLPPSYKRPELSVLDATKLESCIEAIKNVVGDSIPESTLTENILKHN
LNSEAALDAILATTSSNNASEKPAINQNNEDLLQGKKLAAKPAVPVLLSSPAVKVIPSAT
RSVVKGFDISGTDGDFLNTTVESPRSQSPFSGQTSPDIRRKDIKTVSSKSNTPRCQSPAV
EQDNKSKLNSKKLDAISLFKNLRGDIKEQLHLVVVGHVDAGKSTLLGRLLCDLGQVSSKL
LHKFQTESKKIGKQSFAYAWVLDETGEERERGVTMDVGHSKFETATKTITLLDAPGHKDF
IPNMIMGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRPLGVSQLAVVINKLDTV
DWSKDRYDEIVEKMRVFLKQAGFRDAVPFVPCSGLSGENLISKSKEEGLIKWYNGPTLTE
VIDQFKCPKRPVDQPFRFSVNDIYKGTGSGFCVSGHVETGMIATSDKVLVLPHNEVASVR
GLQIDDMPVTNGFAGDHLVFTLTGIDQQIIAVGDLLCDPQHPVPVTTRFEAHIVIFAVAM
PITRGLPVVMHHQSLVEPVVLKKLIAQLHKSSGEVIKKKPRCLPKNSSAIVEIETQRPIC
MELYRDVKQLGRIMLRVGGSTIAAGLVTKIY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacagaaacgtccgttctatgaattactctgatgagtatgatggatatgat
gatgtttatgggcattccgttgaagatgattattgcgtttctccaagtgtttcaatttta
gcggaacaattcttatttgaccgaaacaagcagcataacatttcttcatacattacggaa
gatgacatagtggaggaagatgaaactcaagaggagaccccattgcccccgagctataaa
aggccggaactctcagttcttgatgcaacaaaactagagtcctgcatcgaagctataaaa
aatgttgtcggtgactctatccctgagtccacactcacggaaaatattctcaagcataac
cttaactcagaagctgcacttgatgctatacttgctactacgtcgtcaaacaatgcatct
gaaaagccagccatcaatcaaaataatgaggatcttcttcaaggtaaaaaactagccgct
aaaccagcagtacctgtgctactatcctcccctgctgtaaaagtaattccatcagcgaca
cggtcggtcgtcaaaggcttcgacattagtggaacagacggagatttccttaacacaaca
gttgagagtccgagatctcaaagtccattctccgggcaaacctcacctgatattcgaaga
aaagacattaaaacagtttcatcaaaatcaaacaccccaagatgtcagtccccagcagta
gaacaagataacaaatcgaaattaaatagtaaaaaattggatgcgatcagcctgttcaag
aatcttcgtggagacataaaggagcagttgcacttggtagtcgtcggccatgttgatgcc
ggaaagagcacattactgggtagactgctctgcgatctaggacaggtgtcttcaaaatta
ttacacaaatttcaaactgaaagcaagaagattggcaagcaatcgtttgcatatgcatgg
gtgctcgatgaaactggcgaagaaagggaacgtggtgtcacaatggacgttggccactcc
aaatttgaaaccgctactaaaactattacacttttggatgccccaggtcacaaagacttt
attccaaacatgattatgggtgcgacccaagccgacgtggctcttctagttgttgatgct
acgagaggagaatttgaaactggttttgacagcggtggacaaacaagagaacatgctttg
cttttacgccctctcggtgtctctcagctggcagtagtaataaacaaattggataccgtt
gactggtccaaggatagatacgatgaaatagttgaaaagatgagagttttccttaagcag
gctggttttcgagacgctgtaccatttgtaccatgtagcggtttgtccggggaaaattta
atctccaaatccaaggaggaaggactgattaaatggtacaacggacccaccttgaccgaa
gttatcgatcagttcaaatgtccaaaacgacctgttgaccaacccttcaggttttcggtg
aatgacatttacaagggaactggctcaggattttgtgtatcgggacatgttgagactggg
atgattgctacgagtgataaggtgttagtactacctcacaacgaagtcgcttctgtccga
ggcttacagatagacgatatgcctgtaacaaatgggtttgccggcgaccatcttgtcttc
acattgacagggatagatcagcagattatagctgttggcgacttgttatgtgatccccag
cacccggtcccagttacgactcgattcgaagcgcacatagtaatatttgctgtagcgatg
ccgattactcgtggccttccggtagtaatgcatcaccaatcgcttgtggagccagtggtg
ttaaagaaactcattgctcagctccacaaaagttctggggaagtgataaaaaaaaaacct
cgatgtctgcccaaaaattctagcgctatcgttgaaatagaaactcagagacctatttgc
atggaattatacagagacgttaagcaacttggcagaattatgctgcgtgtgggtggttct
actatagctgctggtttggttactaagatatactaa
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