Neodiprion virginianus: 124300049
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Entry
124300049 CDS
T09046
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
nvg
Neodiprion virginianus
Pathway
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124300049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124300049
Spliceosome [BR:
nvg03041
]
Complex B
Other components
Prp19-related factors
124300049
Complex C
124300049
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_occluded
zf_CCCH_4
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
zf-CCCH_10
zf-CCCH_12
RRM_3
zf-CCCH_PARP12
DUF5092
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
124300049
NCBI-ProteinID:
XP_046609630
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Position
3:complement(26965958..26967896)
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AA seq
407 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKERYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKLDATTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLEPPEDKSITTLYIGNLG
DVLTEKQLRDHFYQYGEIRSITMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQAISAAETIKEMLEPVPGLPGALPPPPENMGNNFFNLQATPGIMMIPPPPVA
PQFMFTPPMAAAAPIFPPGTTPIHYPSQDPSRMGATQGIGKPWPEED
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccacttccaaaaccacaaatacttataatagacaaaattgggaagatgctgaattt
ccgatcttgtgtcagacatgtttgggcgataatccgtatattcgtatgacaaaggaacgc
tatggcaaagaatgtaaaatatgcatgcgtccattcacagtattcagatggtgtccaggt
gcaagaatgcgtttcaaaaagactgaagtttgtcaaacatgtagtcgtctgaaaaacgta
tgtcagacatgcctcttagacttggaatatggcctgccaatccaagtacgagatgcagcg
ttaaaaattaaagacgatttgccaagatctgatgtgaataaggaatactatgttcagaac
attgacaatgaaataggcaaactggatgcaacaactccagcaggtgctgttggtaaatca
gctgccgccagcgacttgctgatgaagctagcaaggacaagtccatattataaaagaaac
agacctcacatttgctctttttgggtgaaaggagagtgtaagagaggggaagagtgccct
tatcgtcacgaaaagcccacagatcccgatgatccattagcagatcaaaatatcaaggat
cgttattatggggtaaacgatcccgttgctgacaaattgatgcgcagagctgcagcaatg
ccaaaattggaaccaccagaggacaaatcaataacaactttgtatattggaaatttggga
gatgttttaacggaaaaacaattgcgtgaccatttctatcaatatggtgaaattcgatca
attacaatggtgccgcggcaacagtgtgcctttattcaatacacacagcgaagtgcggcg
gaagctgccgctgaacgaacattcaacaaactaatactgggaggaagacgtttgaccata
aagtggggcaggtcacaaggcagacaggctatttcggccgcagaaacaatcaaggaaatg
ttagagcctgttcccgggcttcctggagcactacccccgccacctgagaatatgggcaac
aatttctttaatttgcaagccacgccaggaatcatgatgatacctccacctccagtagct
ccacaatttatgtttactcctccaatggctgctgctgcacctatctttcctccaggaact
acaccaattcattatccaagtcaagacccttcaaggatgggagcaacgcagggcattggc
aaaccgtggccagaagaagattaa
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