Neodiprion virginianus: 124300120
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Entry
124300120 CDS
T09046
Name
(RefSeq) terminal nucleotidyltransferase 4B-like isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124300120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124300120
03016 Transfer RNA biogenesis [BR:
nvg03016
]
124300120
Enzymes [BR:
nvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
124300120
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
124300120
Transfer RNA biogenesis [BR:
nvg03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
124300120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
RCR
Motif
Other DBs
NCBI-GeneID:
124300120
NCBI-ProteinID:
XP_046609764
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All DBs
Position
3:19383037..19390460
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AA seq
595 aa
AA seq
DB search
MDPNIGWFQPEQFGPAKVLWSQLWEAEIAEKRLDILTLKTDNTSNAMGNKVQQDYISLDS
VSSRVGEDRLAPRVQLSTCNIYYNPSRRKGDNRASTYGMNYNSDALIGEYGGCPWRQPDK
HYLKGVLGLHQEIEDFFTYMRPSVEEQKLRLRVVKRIEDVIHDLWPNSKVEVFGSFRTGL
YLPTSDIDLVVIGMWKMLPLRTLERALLDRNIAEPTSIKVLDKASVPIVKLTDKETEIKM
DISFNMDNGVKSAELINSYKHEFPVLDKLVMVLKQFLLQRDLNEVFTGGISSYSLVLMTI
SFLQLHPRQNAYCPKANLGVLLIEFLELYGRKFNYVKTGIRVKDGGTYISKEEVQRDMID
GHRPSLLCIEDPLAPGNDIGRSSYGALYVKEAFDWAYSVLSQAVSPLNILVNDVNKVSIL
GRIIRVTDEVIEYRKWIKETFPLPLGETDSLSSSTGSDASTLSAPASDTDSECSRGNSPN
TAEGKGEERNEDNHTYDDQQRQQHQPKKHYKPNAHVNNQQNSRGNYQHGVSHNNSGKNKV
KHPQQNNMSSSNNNNSNSNNNNSNSGNQSPNMRTVTMKRKKSQLTRRGPGNDCVR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaacattggttggtttcaacccgagcagttcggccccgctaaggtcttgtgg
tcacaactttgggaggctgaaattgctgaaaagagacttgatatcctgacacttaagacc
gacaatacgtccaacgcgatgggtaataaagtgcagcaggattacatatcattagattcg
gtgtcgagtcgtgtcggggaggatcgtttagcaccgcgcgttcaactcagtacctgtaac
atttattacaatccgtcgaggaggaaaggcgacaaccgcgctagtacttacggtatgaac
tacaattccgatgctctgatcggagaatacggcggttgtccctggcgtcagccggacaag
cattacttgaagggagtccttgggttacaccaggagatcgaggactttttcacttacatg
cgtccctccgtggaagagcagaaattgagattacgtgtcgtcaaaagaatagaagatgtg
atacacgacttgtggcccaattcgaaagttgaagtttttggaagctttcgtactgggcta
tatctacctacaagtgacattgacctggttgtaattggtatgtggaaaatgcttccatta
agaacactagaacgagcactgctggaccgcaatatagctgaaccaacatctatcaaagta
ctagacaaagctagcgtaccaattgtgaagctgactgacaaagaaactgaaatcaagatg
gacatcagcttcaacatggataatggcgttaaatctgcagaacttatcaattcgtacaaa
catgagttccctgtacttgacaaacttgtcatggttttaaaacaatttttgttgcaaaga
gacctaaacgaagtattcacaggtggcatttcgtcctacagtcttgttctgatgactatt
agctttttgcagctacaccctagacagaatgcctattgtccgaaagctaatttgggtgta
ttattgattgaatttctagaactctatggcaggaaattcaattatgttaaaactggtatt
agagtcaaagatggtggtacttacatatctaaagaggaggtccaacgtgatatgatcgat
ggacacagaccttctcttctgtgcattgaagatccgcttgcaccaggcaatgacattggt
cgtagtagctacggagctctctatgtaaaggaagcctttgattgggcttattctgtcctg
tctcaagcagtcagtcctctcaatatactggtaaatgatgtaaacaaagtaagtatattg
ggcagaataattcgggtaacagacgaagtgattgagtatcgaaaatggattaaagaaaca
ttcccactgcctcttggcgagacggactctctttccagttctacagggtcagatgcatca
actctttctgcacctgccagtgacacggattctgaatgcagtcgtggcaattcacctaat
actgctgagggtaaaggagaagaaagaaatgaggataatcatacttacgacgaccagcaa
cgtcagcaacatcagccaaagaaacactacaaaccaaatgcacatgttaataatcagcag
aactcgcgtggaaattatcaacacggagtaagccacaataattctggaaaaaataaggtg
aaacatccacagcaaaataatatgagcagcagtaacaataacaatagcaacagcaacaat
aataatagtaacagtggaaatcagagtccgaatatgagaactgttacaatgaagcgaaaa
aagtctcagctaactcgccgtggacccggaaatgattgtgtgcggtga
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