Neodiprion virginianus: 124300160
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Entry
124300160 CDS
T09046
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
nvg
Neodiprion virginianus
Pathway
nvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124300160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124300160
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124300160
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
124300160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
124300160
NCBI-ProteinID:
XP_046609822
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All DBs
Position
3:41512161..41513590
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AA seq
275 aa
AA seq
DB search
MSGQDLVSDQGLRVDGRRANELRQIRVRMGVFGQSDGSAYLEQGNTKVLAAVYGPHQPRG
GGRGGNRSGTGIINCQYSMAVFSFSAGERKKRPRGDRKTQETSLQLRRAIEAIVQVELYP
RSQIDVFVEVLQSDGSDYCAAVNAATLALIDAGIPIKDYSVGCTATIASMGASEEIDSKD
ETGSGTGIVDANHMEECTGATTLTVVALPGAPGCNYESDTDNSGLVVVAQGTGARLHLSR
LEGLRQRALQGCRDTRVILDQAVRFHLTTHDPHFI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccaagacttagtgtcggaccaaggactaagagtcgatggacgacgagcaaat
gagttgagacagattcgagttcgaatgggtgtcttcgggcagtcggatgggagtgcttac
ctagaacagggcaacacaaaagttttggctgcagtgtacgggccccatcagccaagagga
gggggtcgtggtgggaacagaagtggcacgggaattataaattgccagtacagtatggct
gtgttcagttttagtgccggtgagcgcaagaaacgaccacgcggtgatcggaagacccaa
gaaacgtccctgcagctacgcagggctatcgaagctattgtacaagtagaactgtatcct
cgctctcaaatcgacgtgtttgtcgaagtccttcagtccgacggcagtgattattgcgca
gcagtaaacgcagcgactctcgctctaatcgacgctggtattcccattaaggattactct
gtaggatgcacagcaacgatagccagcatgggagcttcggaagaaatcgacagtaaggat
gagacaggatctggaacaggaatagtcgatgcaaatcatatggaggaatgtacaggagcg
acgacattaactgtcgttgctttaccaggagcccctggctgtaattatgagtcagatacc
gacaattccggtttagtagtcgtggcgcaaggaactggcgcacgactccatctctccagg
ctcgaagggctcaggcaacgagcgttgcagggctgtcgggatacaagggtgattcttgat
caagcagttagattccatttaacgacacatgatcctcattttatttag
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