KEGG   Neodiprion virginianus: 124300272
Entry
124300272         CDS       T09046                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
nvg  Neodiprion virginianus
Pathway
nvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124300272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nvg03041]
    124300272
   04121 Ubiquitin system [BR:nvg04121]
    124300272
Spliceosome [BR:nvg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    124300272
Ubiquitin system [BR:nvg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124300272
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 124300272
NCBI-ProteinID: XP_046610133
LinkDB
Position
3:complement(28299546..28309197)
AA seq 752 aa
MGSNKRHKTEKTRETKKKRHRSRSRSHSIEREKVDKHRHHKKHKRRERKDHDSDVEIVSA
PPPPKISRIPHALTPPPPPEISRQRSASPTKGGAAQTSLSVEETNKLRAKLGLKPLETST
TSVDDPNKIKDDLGEFYHKPAPNTNDKVKTQKIKDRLNTQKEKRQIESNLSKLKTLGESD
SDDDAKAWVQKNRLLQLEKKKADERAKMLDQLDEEFGIGTLVEEEVQSERRSAYSNKDLR
GLKVEHDMDTFEEGKTLVLTLKDQAVLDEHEDVLVNVNMLDEERYLRSNLNKTKKPGYDA
YDEDNFDEFGFPVKTVLDKYDEEIDGQKKESFAIGYDNAKERKQRQTEIVKHRLANKKLE
TLRMPELQLASEYYTDAELAKFKKPKKKIRKIRQKKMLKADDLVPDTTDYLRDLGSRRNS
RHKEKKDHEDPENLVMDVDDTENTSEDLSGVKIEDDDRELEWQLALKKAQRVKLARQTGV
EKVAQTIKQEIDNSNDNQVGNIVLNATAEFCRTLGDIPTYGLAGNREENVQELMDFEAEG
IKDETVDDGEDADGRGAWNTVKIDEAAAEPITLEAAILDAEPSLGQGVGGALRLAMSKGY
LQKEDTNRPSASRFAHLQAQNYSIEDKTYGDDDKFGRRDRFNGPTSEFKERDGFKPNVKL
EYIDDDGHVLSAKEAFRYLSHKFHGKGPGKNKVEKRMKKSEQEVLMKRMSSTDTPLGTLN
LLQAKQKETQSPYIVLSGSKQLQTTSISKTKH
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgggatctaataagcggcacaagactgaaaaaactcgtgaaactaagaaaaaacgtcat
cgcagccgttctagatcgcactctatagaacgtgaaaaagtcgacaaacataggcatcac
aaaaaacataaaagaagagaacgcaaggatcacgacagcgatgttgaaattgtcagcgct
ccaccacctccaaaaatatcgagaataccacatgcactgacgccaccacctcctccagaa
atatctcgtcaaaggagtgcatctccaaccaaaggaggagcagcgcagacatcattgtca
gttgaggaaacaaataagttacgagcaaagcttggtctaaaacctttggagaccagtact
acctctgtagatgatcctaacaaaatcaaagatgatttaggagaattttatcacaagcca
gcaccaaatactaacgataaagtaaaaacgcaaaagatcaaagatagactgaacacgcag
aaggaaaaacgacagattgaatccaatctttcaaaactcaaaactttgggcgaaagcgat
tcagatgatgacgccaaggcttgggtgcaaaaaaaccgtctccttcagttggagaaaaag
aaggctgatgaaagggcaaaaatgttggatcagttggacgaagagttcggtataggtact
cttgttgaggaagaggttcaaagtgaacgtcgttcagcctactcgaacaaagatttacga
gggctcaaagtcgaacatgacatggatacttttgaggagggcaagacccttgtactgaca
ctcaaagatcaggcagttttagatgagcatgaagatgtactagtaaacgtaaatatgctg
gacgaagagcgttatttgcgcagtaatttgaataaaactaaaaaacctgggtacgatgcg
tatgatgaagacaattttgatgagtttggattcccagtgaaaacggttctagacaaatat
gatgaagagatagatggacagaagaaggaaagttttgccattggttatgataatgctaaa
gaacgaaaacaacgacaaactgaaattgtaaaacaccgcctagcgaacaaaaaattggaa
acactaaggatgccagagctacagttagctagtgaatattacactgatgctgagttggca
aagtttaagaaacccaagaaaaaaatccgaaaaatcagacagaaaaagatgttgaaggca
gacgatcttgttcctgatacaactgattatctcagagatttaggaagtcgaaggaattca
agacataaagaaaaaaaggatcatgaggatcctgaaaatcttgttatggatgtcgatgat
acagaaaatacaagtgaagacttgtcgggtgttaaaattgaagatgatgacagagaactc
gaatggcagttggcattgaaaaaagcacaacgtgtgaaactagcacgtcaaactggggta
gaaaaagttgctcaaacaataaaacaagaaattgacaattcaaatgacaatcaagttggt
aatattgtactcaatgcgactgctgaattttgtagaacattaggagacattccaacttac
gggcttgctggaaacagggaagaaaatgttcaagaactcatggactttgaggctgagggg
atcaaagatgaaacggtagatgatggagaagatgctgatggccgtggagcttggaataca
gtaaaaatagatgaagctgcagctgagccaataacactggaggctgcaattttggatgca
gaaccatcgcttggacagggtgtaggcggtgctctaagacttgcaatgagtaaaggttat
ttacaaaaagaggatactaacagaccttctgcatcccgttttgctcatttacaggcacaa
aattattctattgaagataaaacttatggggatgatgacaagtttggcagaagagatagg
tttaatggaccaacttccgaattcaaagaacgagacggatttaagcccaatgtcaagttg
gaatatatcgacgatgatggacacgttttgagtgccaaggaagcattccgatatctttct
cataaatttcatggtaaaggtcctgggaagaacaaggtggaaaagagaatgaagaaatct
gagcaagaagtattgatgaagcggatgtcttctactgatactccactaggtacacttaat
ctattgcaagctaagcaaaaagaaacacaatctccatacattgtgctgagtggcagcaag
cagttgcaaacgacgagcatatcaaagacgaagcattaa

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