Neodiprion virginianus: 124300317
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Entry
124300317 CDS
T09046
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvg03009
]
124300317
Enzymes [BR:
nvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124300317
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
90S particles
Helicases
124300317
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
124300317
NCBI-ProteinID:
XP_046610234
LinkDB
All DBs
Position
1:complement(30609957..30615037)
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AA seq
815 aa
AA seq
DB search
MSNKGTKKKVKIYHKKKYEPEEKIIEKLQAAYKTVDISKVKTFSDLPLSQRTLRGLKVNE
FLEPTEIQRQSIALALRGLDILGAAKTGSGKTLAFLIPILEILYCKQWTRLDAVGALVIT
PTRELAYQIYETLRKVGCYHDFSAGLIIGGKDLHFEKKRMHQCNIVICTPGRLLQHMDEN
PLFDCVNMQVLVLDEADRCLDMGFEQTMNSIIENLPSQRQTLLFSATQTKSVKDLARLSL
HDPMYVSVHEHATHKTPERLQQSYVVCNLEDKMSMLWSFVRNHLRQKILVFFSSCKQVKY
VNDMFCRLKPGVSLLALYGTLHQLKRMAIYEAFCKKQHAVLFATDIAARGLDFPAVNWVV
QMDCPEDVNAYIHRAGRTARFQRGGESLLVLLPSEINMIEQLQEHKVPINVIKINPNKLQ
SPHRKMEALLARDVALKETAQRAFVAYVKSVFLMKDKSIFDVHQLNTDAYAKSLGLAIPP
RIRFLQKINKAKENVRAKKLSKLTDSTNSEISQKLSNYNIESDSDSDKGSGNSASGNEPR
ENSDNEYHAVDSRDRRDTFFGNEDSDSDENILTVKRRDIDIQDDNDSLNDHTEDEYTENI
DNTNTAKKKAVTKAALAKKILKKKIVANKKTTFDDEGQVIVNPTKSKMSERAREYENEES
SGIDIEKAKAILREEDRFDKERFKERIRAKHREEKQKLKASRKKVHEEVEQEGEDAEDEG
DSDGSSDENEPDLSWLPDPDKIYGKREDTDAIQFDNASEDTDEIDRIPKRKLLDNEEING
KKNRKKAKLCDKNVGLSLLEDEELALQLLKNRFIK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataaagggacgaaaaaaaaagtcaagatataccataagaaaaaatatgaacct
gaagagaagatcattgaaaaacttcaagctgcctataaaacggtcgatatttctaaagtc
aagactttttccgacctcccactgtcgcagcgaactctaagaggtttgaaagtaaacgag
ttcctcgagccgacggaaattcaacgacaaagcatcgctttagcattgcgtggccttgat
attttgggagcagcaaaaacaggcagcggaaaaactttagcctttttaataccgatttta
gagattttatactgtaaacaatggacacgattggatgctgttggagccctggttatcacg
ccaaccagggagttggcttatcaaatatacgaaaccttaagaaaagttggctgttaccat
gatttttcggctggtcttattatcggcggtaaagatctgcattttgaaaaaaaacggatg
catcagtgcaacattgtcatctgtacgcctggtagattgttgcaacatatggatgagaat
ccattatttgactgtgtgaatatgcaggtattagttcttgatgaagctgatcgatgttta
gatatgggattcgagcaaacgatgaatagcattattgagaatttgccatctcaacggcaa
acacttttattttcagcaacgcaaactaagtcagtcaaggatttggccagattgagttta
catgatccaatgtatgtatctgttcatgaacatgccacacataagacaccagagcgttta
caacagagttatgttgtctgtaatttggaggataaaatgtcaatgttgtggtcttttgtt
aggaatcatttgcggcaaaaaatacttgtatttttctccagctgcaaacaggtcaaatac
gtgaatgatatgttttgccgtttaaaaccaggagtaagtttgcttgcattgtatggtaca
cttcaccagttgaaacgaatggctatttatgaagcattttgcaaaaaacagcatgctgta
ctttttgctactgatattgccgccagaggattagatttcccggcggtgaattgggtagtg
caaatggattgtccagaagatgtcaatgcttatatacatcgagcaggtagaactgccaga
ttccaaagaggtggagaatccttacttgttttactgccaagtgagatcaatatgattgag
caactgcaggaacataaagttcctattaatgttatcaaaatcaatccgaataaactgcag
tcccctcacagaaagatggaagcattacttgctagagatgtggcgctgaaagagacggct
cagagagcctttgttgcttatgtaaaatccgtctttcttatgaaagacaagagtatattc
gacgtgcatcagctaaatacggatgcctatgccaaatcattgggattggcaataccaccc
aggatacgatttcttcaaaaaatcaataaagcgaaggaaaatgtacgtgcgaaaaaactc
agtaaattaaccgattctacaaattccgaaatatcacaaaaactaagtaattataacatc
gaatcagatagtgattccgataaaggatctggaaatagcgcgagtggcaatgagccacgt
gagaatagtgacaatgaatatcatgctgttgattcgcgggatcgaagagacacatttttt
ggcaatgaggatagtgacagtgacgaaaatattctaactgtaaaacggcgagacatagac
atccaagacgacaacgattctctgaacgatcatacggaagatgaatatactgaaaacata
gacaatacaaatacagcaaagaagaaagctgtcacaaaagctgcattagctaaaaaaatt
ctgaagaagaaaatagttgcgaataaaaaaactacttttgatgatgagggccaggtgatt
gtaaaccctacaaaatctaaaatgtctgagagagcacgtgaatacgaaaatgaagagagc
tctgggattgatattgaaaaagcaaaggcgatactacgtgaggaggatcgttttgataaa
gaacgattcaaagaaagaataagagcaaaacatcgggaagagaaacagaaattgaaagct
agcagaaagaaggttcatgaggaggtagaacaagaaggagaggatgcagaggatgaagga
gatagtgatggtagtagcgatgagaacgagccagacctgtcctggttgccagatccagat
aaaatttatggcaaacgcgaggataccgatgctattcaattcgataatgccagtgaagat
actgacgaaattgacagaatacccaaaagaaagttgttagataatgaagaaataaacgga
aagaaaaatagaaaaaaggctaaattgtgcgataagaatgttggtcttagtctactcgaa
gatgaagagcttgctttacaacttctgaaaaatcgatttataaagtaa
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