KEGG   Neodiprion virginianus: 124300712
Entry
124300712         CDS       T09046                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
nvg  Neodiprion virginianus
Pathway
nvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124300712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nvg03041]
    124300712
   03036 Chromosome and associated proteins [BR:nvg03036]
    124300712
Spliceosome [BR:nvg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    124300712
 Complex B
    124300712
 Complex C
   U2 SnRNP specific factors
    124300712
Chromosome and associated proteins [BR:nvg03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    124300712
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 124300712
NCBI-ProteinID: XP_046610982
LinkDB
Position
3:16981865..16996733
AA seq 1316 aa
MDSIPRTHEDIEAQIREIQSKKEIQNKELTEKEQVGLGKTGFYDQDIYDGSNNKYDGYVT
SIAANDEVEDEDYEPSTFSQSKRPGYNAPAALLNDVAQSEKDYDPFADRRRPTIADREDE
YRQKRRRMIISPERVDPFAEGGKTPDVGSRTYTEIMREQFLKGEESELRKKLVEKAKDGT
LKANGEPKPAPKKRGRWDQTEDTPVAKKPAGTAATPTSWDNADVTPAAIRWDETPGHGKG
GETPGATPGVSTRMWEATPGHATPGAVTPGRETPSHDKAASSRRNRWDETPKTERETPGH
NSGWAETPRTDRVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQS
SILTPSGVTPTGPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDAMFP
PGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPQGFFIQQEDKSAKFVDNQPKGNLPFMK
PEDAQYFDKLLVDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGA
GPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFL
KAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALA
IAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTRE
VMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDRR
NYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRL
EEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVR
QQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTK
MTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKA
HKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV
LPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTA
CAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQ
YTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRILNDPKNQYIRYELDYVL
NT seq 3951 nt   +upstreamnt  +downstreamnt
atggattcaattccacgaacccacgaagacatcgaagctcagatccgtgaaatacaatcg
aaaaaggagatacagaataaagagctgactgaaaaagagcaagtagggttgggaaagact
ggattctatgatcaggacatatatgatggtagcaacaacaaatacgatggttatgtcacc
tctattgcagctaatgacgaggttgaggatgaagattatgaaccaagtacatttagtcaa
agcaagaggccaggctacaatgctccggcagcgctgcttaatgatgttgctcagagtgaa
aaggactatgatccgtttgctgatagacgacggccgacaattgcggatagagaagatgag
tacaggcaaaagagacgacggatgatcatctcaccagaacgtgtcgatccatttgctgaa
ggcggtaagactccagatgtcggctcaaggacttacacagagatcatgcgcgagcagttt
cttaaaggggaagaatctgagttgagaaaaaaattagtggagaaagctaaagatggcact
ttgaaggccaatggagagccgaagcctgcaccgaaaaaacgaggtcgttgggatcagaca
gaggacacgcctgttgcaaaaaaaccagccggtacagcagctactcctacatcctgggat
aatgctgatgttacaccagctgctataagatgggatgaaactcctggccatggcaaaggt
ggtgaaactccaggagccactcctggggttagtacaagaatgtgggaagctactccaggt
catgctacaccaggtgcagtgactccagggcgtgaaacaccatcgcatgacaaagccgca
tccagccgcagaaatcgttgggatgaaaccccgaaaactgaaagagaaactcctggtcat
aatagcggttgggcggaaactccaagaaccgatagagttgccggtgatttaatacaagaa
acacctacaccgtcagccagcaaacgacgcagtcgttgggatgaaacaccctctaatcaa
acacctggatctatgactccgcaaacacctgccacaccgctgacaacacctcatcaaagt
tctatcttaacacccagcggcgtaacacctacgggacccaaagcaatgggactagcaaca
ccgacacccgggcacttgatgtctatgacgcccgagcaattgcaggcttatcgttgggag
cgtgaaattgacgaacgtaatcgacctctgtcggacgatgaacttgatgccatgtttccc
ccgggttacaaagtgctgcagccacctgcagggtatattccaattcgtactccagcaaga
aagttgaccgcaactccgacgccgatagcaggcacgccgcaaggatttttcatacagcaa
gaagataagagtgccaagttcgttgacaatcaacccaaaggcaaccttccattcatgaaa
ccagaggacgctcaatacttcgacaagcttttagttgatgttgatgaggaatctctcagc
cctgaggaacagaaagaaaggaagataatgaaactccttctcaaaataaagaatggtact
ccgccaatgcgaaaggcagcgctcagacaaattacagacaaagcccgggagtttggagca
ggtcctcttttcaatcaaattctaccgctcctcatgtcacccacattagaggatcaagag
cgacatctacttgttaaagttatcgaccgcattctgtacaaattagacgatttggtcaga
ccgtacgtgcacaaaatccttgttgtaattgaacccttgctgattgatgaagattactat
gctcgagtagagggtcgagaaattatttctaatctggcaaaggccgctggattggctaca
atgatttccacaatgcgacctgacatcgacaacattgatgaatatgtgagaaacacgaca
gctagagcatttgctgtcgttgcctctgcgcttggaattccatctttactacctttcttg
aaagctgtgtgtcgcagtaaaaaatcatggcaagctcgccacaccggtattaaaattgtg
cagcaaattgcaattcttatgggatgtgctatcttaccacatctgaagagcttggtagaa
attattgagcatggtctcgtagatgaacaacaaaaagttcgaaccatcacagcgttggcc
atagctgcattggctgaagcagctactccctacggtattgagagcttcgattccgtcttg
aagcccttgtggaagggtattcgtactcacagaggaaaaggattggcagcgtttttgaaa
gcaattggttatctgattccgcttatggacgcagaatatgcaaactattatactcgtgaa
gtaatgctgattttgatcagagagtttcaatctcctgacgaggagatgaaaaaaattgtc
ctgaaagttgttaaacaatgttgcggtacagatggtgtcgaagctcagtatataaaggat
gagatacttccacacttcttcaaacacttttggaatcatcgtatggctttagatcgcaga
aattacagacagttggtagataccacagtcgaaatagcaaataaggttggtgcatctgag
ataataaacagagtcgtcgacgatctgaaagatgaaaatgagcagtacagaaaaatggtc
atggaaacaattgaaaaaataatgggcaatttgggagccgccgacgtcgattctcgatta
gaagagcaactaattgatggcattctttatgcattccaagaacagaccactgaggacgtc
gtaatgctcaatggattcggaactatagtcaatacgctcggtaaaagagtaaaagcttac
ttgccgcagatttgtggtacgattctttggcgtctcaataataaatccgctaaagtacgt
cagcaagccgcggatctcatttcacgaattgctgttgtaatgaagacatgtcaagaggaa
aaactgatgggtcacttgggtgtcgtgttgtacgaatatctgggggaagagtatcctgaa
gtattgggaagtattttaggtgccttgaaagctattgtgaacgttataggcatgacaaaa
atgacgccgcctatcaaagacctgttgccacgtctcacgccaattctgaaaaataggcac
gaaaaggtacaagaaaattgtatcgatttggtaggaagaatcgcagacaggggacctgag
tatgtttccgcacgagagtggatgcgaatctgtttcgaattactggaattactcaaagcg
cataagaaagcaattagaagagctacggtcaacacctttggatacatcgcgaaggctatt
gggcctcacgacgttttggcaacgttactcaataatctcaaagttcaagaacgacaaaat
cgcgtttgcacaacagtcgccattgctatagttgcggaaacttgtagtcctttcacagtt
ttgccagcattgatgaacgagtacagagttcccgagcttaatgttcaaaacggtgtatta
aaatcgctttcctttttatttgaatatattggagaaatgggcaaagattacatatatgcc
gttagtccattactggaggatgcccttatggacagggacctggtacacagacagactgct
tgtgctgcaatcaaacacatggctttaggagtttacggctttggctgtgaagatgctctg
atccatctcctgaatcacgtttggcctaatgtttttgaaacctctccccatttggttcag
gctttcatggatgctgtagatggtcttcgtgtcgcattgggcccgataaaaattcttcag
tatacattacaagggctatttcacccagctagaaaagttcgagacgtctattggaaaata
tataattctctttatattggcggacaggatgcgcttgtggccgggtatccacggatttta
aatgacccgaagaaccaatacattaggtacgaattagactatgttttataa

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