Neodiprion virginianus: 124300893
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Entry
124300893 CDS
T09046
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvg03036
]
124300893
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124300893
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124300893
NCBI-ProteinID:
XP_046611326
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Position
3:24879432..24893268
Genome browser
AA seq
1387 aa
AA seq
DB search
MPRPKRTSTKRYKAEEVSEDSSAGSGSDFDDDEDPDKIEVPGGGKDLATAAGIGGIKEEK
PLVPAPLLKGHGGVSTFVEPSPLLNQKFANKLPGGLVTKSNAAPGYEMLRVGGSQGTPAF
MGVGGMGPVGQMAANNPYAFPPSLASLAGYNPAALFQHSKSPSAMEMSNMMGMGSLMGLG
SMAGLNPFMLQQFLTQNGMHPNWSGGLSGKAVSQLWMNSGDPGKMNMQPTLPEEEEVDDE
DMGVAETYADYMPTKLKLGRKHPDPVVETASLSSVEPTDVWYKVVIPEEIIRSGALSALQ
LESITYASQQHEHLLPDGTRAGFLIGDGAGVGKGRTIAGIIFENYLRGRKRAIWVSVSND
LKYDAERDLKDIGAGKIEVHPLNKFKYAKISSAVNSNVKKGVIFSTYSALIGESSQSGGK
YKSRLKQLLQWCGEDFDGLIVFDECHRAKNLCPTGSSKPTKTGLTVLELQNKLPKARVVY
ASATGASEPRNMAYMVRCGMWGEGTPFPEFTDFIAAVEKRGVGAMEIVAMDMKLRGMYIA
RQLSFHGVAFKIEEVPLSKEFTKVYDTSVKLWVEAMQKFQEAAELIDAENRMKKTMWGQF
WSSHQRFFKYLCIAAKVKHAVAVAREAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDF
VSTAKGVLQTLVEKHFPAPDRNRIHRLLGLEPPKSGKSHNGDFEEAGGSTGKRKPVRQAA
QRASKKVKTWSTDDDVSEDDRNGGGRSSGSEFKLSGTESEDDNRSDDESNASSDFNPFYS
DSDSDADPWDRRKKKGKKHKKSPKKRLSTQDKIQSMLASKTSHNKNKRNGESGMGMPGMG
LSMSQAPPRDAIERACCIKEELLAQIESLGDKLPPNTLDQLIDELGGPENVAEMTGRKGR
VVQTEDGAIQYESRSEVDVPLETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARN
QMRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESL
GALTHGDRRATETRDLSQFNIDNKYGRAALEATMKTIMGYESPLVPPPQDYKGDFFKDVA
DALVGVGLICNSESMPGVLTLDKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIVTQ
AKKTGRFDMGILDLGTSGENVKRVKLYRFLRKHATGIAPTELHIVHVERGMSWAEAMDRW
ESLTGSKEGFYLSHQVRNGKQTAILAVAVESGKKKGENRKDHLYTVYRPNTGLQLRQETL
GELEKKYKKVETEEAEPHWTQQYDASVDTCSHAYWRGNCKNTTLGLDCEVGLRRRSYNVL
AGSVLSVWSRVENVLATRSGHNSKMQVVRLRTDESLKIVGTLIPKSCMEALREALSSDAE
KTEEQTF
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggccgaaacgaacctcgacaaagaggtataaagctgaagaagtcagcgaagac
agcagtgcaggtagtggcagtgattttgatgacgatgaggatccagataaaatagaagta
ccaggtggtggaaaagatctggcgacagctgcaggcattggcggaattaaagaggagaaa
ccattggttccagctcccttgctcaagggacatggtggagttagcacattcgtggaaccc
tcgccattactcaaccaaaaatttgcaaataaactaccgggtggtctagttacaaaaagc
aacgccgctccgggctacgagatgcttcgtgtcggtgggtctcaggggacaccggccttc
atgggtgtaggtggaatggggccggttggacaaatggctgctaataatccctatgcattt
ccaccgagtcttgctagtttagcaggttacaatcccgctgccctttttcaacatagtaag
tcaccttctgcaatggaaatgagcaatatgatgggaatgggtagtctaatgggccttgga
tctatggctggtctaaacccatttatgctgcaacaattcctaacccaaaacggaatgcat
ccaaattggtctggaggattgtcaggtaaagccgtatctcaattgtggatgaattccggt
gatccgggaaaaatgaacatgcagccgacactgccagaagaagaagaagtggatgatgaa
gatatgggtgttgcagaaacctacgcagattacatgccaacaaaattaaaactaggccga
aagcatcctgatcctgttgtggaaaccgcttcattatctagcgtggagccgacagatgtg
tggtataaagttgtcatccctgaagagattattcggtccggcgccttgtccgcgttgcaa
ttagaatcgataacatatgcatcgcagcagcacgagcacttattaccagatggtacaaga
gctggttttctcataggagatggagctggagtaggaaaaggtcgaacaatagctggaata
atatttgaaaattatttaagaggtagaaaacgggcgatctgggtatctgtttctaatgat
ttgaaatatgatgctgaacgagacttgaaagacataggtgcaggaaaaattgaagtgcat
ccattgaataaatttaaatatgcgaagatatcgtcggccgtgaattcaaacgttaagaaa
ggtgttatattcagtacttactcagccctcatcggcgaatcttctcaaagtgggggtaaa
tacaaaagccgactgaagcagctattacagtggtgtggcgaagactttgatgggttaatt
gtgtttgatgagtgtcacagagcgaaaaatctctgtcctactggtagttcaaaaccaaca
aaaactggccttacggtattagaacttcaaaacaaattgcctaaggcacgtgttgtatac
gcttccgcgacgggtgcgtcggaaccaaggaatatggcttacatggtgagatgtggtatg
tggggggaagggacaccttttccggaattcactgacttcatcgctgctgtagaaaaaaga
ggtgttggcgctatggaaattgtagctatggacatgaagctgagaggaatgtatatagcc
agacagctcagctttcacggtgtggcattcaaaattgaagaagttcctttatccaaagaa
tttacaaaagtgtacgacacttctgtgaaactgtgggttgaagctatgcagaaatttcaa
gaggctgctgaacttattgatgccgaaaacagaatgaaaaaaacaatgtggggacaattc
tggtcttcgcatcaaagatttttcaagtatctttgtatagctgctaaagttaaacatgcg
gtagcagttgctcgtgaagcagtgaaatgtggcaaatgtgtcgtgataggtctacaatct
actggagaagcccgtaccttagaacaactagagagagatgatggagaactcagtgacttt
gtctcaacagccaagggagttcttcaaactctggtggaaaaacacttcccagcacctgat
cgaaatcgaatacatcgattacttggtcttgagccaccgaaatccggcaaatctcataat
ggggactttgaggaagcaggaggttcaacaggaaaacgcaaaccagtgcgtcaagctgca
cagagagcatcgaaaaaggtcaagacatggtctaccgatgatgatgtgtctgaggatgac
agaaatggcggtggtcggagttctggatcggagtttaaactctctggaactgaaagtgaa
gatgataatcgtagcgacgatgaaagtaacgctagttctgactttaatcccttctacagt
gacagtgattctgatgcagatccgtgggaccggaggaaaaaaaaggggaagaagcacaaa
aaatcaccgaaaaaacgtctaagtacgcaagataaaattcagtcgatgcttgcaagtaaa
acatcacataacaaaaataaacggaacggtgagagtggtatgggaatgcctggaatgggc
ctgtcaatgtcgcaagctccaccacgtgatgctatagagcgtgcttgttgcattaaggaa
gaattactggctcagatcgaatctcttggtgacaaattacctccaaatacactagatcaa
cttatcgatgaattaggcggacctgaaaacgttgcagaaatgacaggcagaaaaggtcga
gttgtgcagactgaggatggtgcgattcagtatgaatctcggtcggaagtagatgttcca
ttagaaactttaaatttaacagaaaaacaaaggtttatggatggcgaaaaaacggtagcg
atcatctccgaggccgcgagcagtggtatttctttgcaaagcgataggcgggctagaaat
caaatgcgaagagtacatataactctagaactgccatggagtgccgacagagctatccaa
caatttggaagaactcatagatccaatcaagtcaatgctccagaatacatttttctaata
tccgacttagctggagaacgaaggttcgcttcaatcgtagcaaaacgtttagaaagcttg
ggggctttaacacacggtgatcgaagagctacagaaacaagagatttgtcacagttcaat
attgataacaaatatggtagggctgcattagaagccactatgaaaacaataatgggttat
gaaagcccactggttccaccaccgcaagattacaaaggagacttctttaaagacgttgca
gatgccttggttggggttggactaatttgtaacagcgagagcatgccaggcgtcttgacc
ttagacaaagattacaataatatgtccaaatttctgaacagaattttaggaatgcccgtc
gatttacaaaatagactttttaagtacttcaccgacacgttgaatgcgatagtgactcag
gcgaagaaaaccggtcgttttgatatggggattctcgatttgggtacatctggtgaaaat
gttaagagagtaaaattgtaccgatttttacggaaacacgcaaccggcattgcgccaacg
gagctacacatcgttcacgttgagagagggatgagctgggcagaagctatggatcggtgg
gaatcactaacaggatccaaagaaggcttttacctgagtcatcaggtcagaaacggaaag
cagacagctatattggctgtggcagtcgaaagtggcaagaaaaaaggtgaaaatagaaag
gaccatctttacacagtctacaggcctaatacgggtctgcagttgcgacaagagacgttg
ggtgaattagagaaaaagtacaaaaaggtggaaactgaagaagccgaaccacattggact
cagcagtatgacgcatcagtagacacatgttctcatgcgtactggcggggaaattgcaaa
aataccacattgggactggattgtgaagttggattgcgtaggcgatcctacaatgtactt
gcaggatcggtgctgagcgtgtggagtcgagtagaaaatgtactagctacaagatctggc
cacaattcaaagatgcaggttgtgcgtttgagaactgatgagagcttaaaaatagtgggc
acgttaatcccaaaatcttgtatggaagcattgcgcgaagctctctcatcagatgctgaa
aaaactgaggagcaaacattctga
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