KEGG   Neodiprion virginianus: 124300992
Entry
124300992         CDS       T09046                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
nvg  Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:nvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nvg03041]
    124300992
Spliceosome [BR:nvg03041]
 Complex B
  Other components
   Complex B specific factors
    124300992
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_IP5PC_F WD_LRWD1 WD40_like LisH_WDR26 zf_topless PROPPIN
Other DBs
NCBI-GeneID: 124300992
NCBI-ProteinID: XP_046611526
LinkDB
Position
1:complement(5980332..5982882)
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVTDINNGHWDTVL
KATQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAHIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMSFSRDSEMLAGGGQDGKMKVWRVQSGQCLR
RFEKAHAKGVTCLQFSRDNSQILSASFDTTIRIHGLKSGKTLKEFRGHISFVNEVVFTPD
GHSIISASSDGTVKLWGLKTTECIGTYKSLGAADLTVNSIHPLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVCACVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLAHHPHQNLLCSYSEDGLLKLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcaatcgaaattgaatccgctgatgttatacgactgattcaacagtacttgaaggag
tctaatcttgtaaaaacactacaaaccttgcaggaggaaactggtgtctcgttgaataca
gttgacagcgttgacggatttgttacggatattaacaatggacattgggatactgtgctt
aaagcgacacagtccctcaaattgcctgataaaaaactcattgatttgtacgaacaggtt
gttttagaactaattgaactaagagaattaggcgcagctagatctctgctgaggcaaact
gacccgatgataatgatgaagcagcaggaacctgaaagatacatccatcttgaaaatctt
ttggcacggtcctactttgacccaagggaagcataccctgatggaagtacaaaggaaaag
cgaagagctcatatagcaactgctttggcgggtgaagtatcagtcgtaccatccagcagg
ctgctagctttgctcggacaagctttgaaatggcagcagcaccaagggctcttgcctcct
ggcacaaccatagatttgttcagaggcaaagcagctgttcgagatcaggaagatgaaaaa
tacccaactcagttatctaagcaaattaagtttgggcaaaagtcacatgttgagtgtgcg
agattttcaccagatggacaatatttggtaacaggctccgtcgacgggtttatagaggtg
tggaactttactactggaaaaatacgaaaagacttgaagtaccaggcacaggataacttc
atgatgatggaacaagccgttttatcaatgtcatttagccgcgatagcgaaatgcttgcc
ggtggtggccaagacgggaaaatgaaagtttggcgtgttcaaagtggccaatgcctccgc
agattcgaaaaagcacatgccaaaggtgtcacttgtcttcagttcagtagagacaacagt
cagatactatccgcatcattcgacaccactataaggatacacgggttaaagtctggaaag
acattgaaagaattccgaggccatatctcatttgtcaatgaagtagttttcaccccggac
ggtcacagcataataagtgcttcctcagatggaacagtcaagctctggggcttgaaaaca
acagagtgcataggcacatacaaatctttgggagctgcagatcttactgtcaacagtatc
catccgttacctcgcaatccggaacattttgtcgtttgtaatcgatcaaacactgtggta
ataatgaacatgcaaggacaaatagtcagatccttctccagtggaaaacgagaaggtgga
gatttcgtttgcgcctgtgttagcccgcgtggagaattcatatactgtgttggagaggat
ctcgttttgtattgtttctccacttcgtcgggaaaacttgagcgaaccctcaacatccat
gaaaaagatgtaatcgggttagctcatcatccgcatcaaaacttgctctgctcatacagt
gaagacggacttctcaaactgtggaaaccgtaa

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